RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 SAMHD1Q9Y3Z3 626 aaKnown RBP16.55■□□□□ 0.24
SSU72-203ENST00000378725 HCFC1P51610 2035 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 TRAV27A0A087WT01 109 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 SLC35F4A4IF30 521 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 NPIPB13A6NJU9 1138 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 NPIPB4C9JG80 1138 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 AKAP8O43823 692 aaKnown RBP16.54■□□□□ 0.24
SSU72-203ENST00000378725 OR10H3O60404 316 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 IGHV3-9P01782 118 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 F13BP05160 661 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 IFNGR1P15260 489 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 IGHV1-2P23083 117 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 GSSP48637 474 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 PRPS1P60891 318 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 ITGADQ13349 1161 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 MICAQ29983 383 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 SFRP5Q5T4F7 317 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 PGBD2Q6P3X8 592 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 MEX3BQ6ZN04 569 aaKnown RBP16.54■□□□□ 0.24
SSU72-203ENST00000378725 SLC35D2Q76EJ3 337 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 CXorf67Q86X51 503 aaPredicted RBP16.54■□□□□ 0.24
SSU72-203ENST00000378725 UBE2J2Q8N2K1 259 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 OR51A7Q8NH64 312 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 OR6X1Q8NH79 312 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 GNPDA2Q8TDQ7 276 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 LRR1Q96L50 414 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 RAB3IPQ96QF0 476 aaPredicted RBP16.54■□□□□ 0.24
SSU72-203ENST00000378725 MCCC2Q9HCC0 563 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 ASB6Q9NWX5 421 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 DNAJB9Q9UBS3 223 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 SIGLEC7Q9Y286 467 aa16.54■□□□□ 0.24
SSU72-203ENST00000378725 CLOCKO15516 846 aa16.53■□□□□ 0.24
SSU72-203ENST00000378725 SLC43A1O75387 559 aa16.53■□□□□ 0.24
SSU72-203ENST00000378725 CCNB2O95067 398 aa16.53■□□□□ 0.24
SSU72-203ENST00000378725 ZNF26P17031 533 aaPredicted RBP16.53■□□□□ 0.24
SSU72-203ENST00000378725 COX5AP20674 150 aa16.53■□□□□ 0.24
SSU72-203ENST00000378725 FPR3P25089 353 aa16.53■□□□□ 0.24
SSU72-203ENST00000378725 CCKARP32238 428 aa16.53■□□□□ 0.24
SSU72-203ENST00000378725 FAPQ12884 760 aa16.53■□□□□ 0.24
SSU72-203ENST00000378725 PPP1R8Q12972 351 aaKnown RBP16.53■□□□□ 0.24
SSU72-203ENST00000378725 ZSCAN26Q16670 478 aa16.53■□□□□ 0.24
SSU72-203ENST00000378725 ALG10Q5BKT4 473 aa16.53■□□□□ 0.24
SSU72-203ENST00000378725 WDFY1Q8IWB7 410 aa16.53■□□□□ 0.24
SSU72-203ENST00000378725 ADAD1Q96M93 576 aaKnown RBP16.53■□□□□ 0.24
SSU72-203ENST00000378725 EMC6Q9BV81 110 aa16.53■□□□□ 0.24
SSU72-203ENST00000378725 SLC24A3Q9HC58 644 aa16.53■□□□□ 0.24
SSU72-203ENST00000378725 UPB1Q9UBR1 384 aa16.53■□□□□ 0.24
SSU72-203ENST00000378725 AP4S1Q9Y587 144 aa16.53■□□□□ 0.24
SSU72-203ENST00000378725 U3KQV3 271 aa16.53■□□□□ 0.24
SSU72-203ENST00000378725 USP9YO00507 2555 aaPredicted RBP16.53■□□□□ 0.24
SSU72-203ENST00000378725 A0A1W2PRG6 482 aa16.52■□□□□ 0.24
SSU72-203ENST00000378725 TUBAL3A6NHL2 446 aa16.52■□□□□ 0.24
SSU72-203ENST00000378725 UNC119BA6NIH7 251 aa16.52■□□□□ 0.24
SSU72-203ENST00000378725 ZNF726A6NNF4 738 aa16.52■□□□□ 0.24
SSU72-203ENST00000378725 GNGT2O14610 69 aa16.52■□□□□ 0.24
SSU72-203ENST00000378725 UPK3AO75631 287 aa16.52■□□□□ 0.24
SSU72-203ENST00000378725 SERPINI2O75830 405 aa16.52■□□□□ 0.24
SSU72-203ENST00000378725 BCL10O95999 233 aa16.52■□□□□ 0.24
SSU72-203ENST00000378725 GASTP01350 101 aa16.52■□□□□ 0.24
SSU72-203ENST00000378725 DNAJA1P31689 397 aaKnown RBP16.52■□□□□ 0.24
SSU72-203ENST00000378725 BIDP55957 195 aa16.52■□□□□ 0.24
SSU72-203ENST00000378725 TSPAN31Q12999 210 aa16.52■□□□□ 0.24
SSU72-203ENST00000378725 SNTB1Q13884 538 aaKnown RBP16.52■□□□□ 0.24
SSU72-203ENST00000378725 KPNB1Q14974 876 aaKnown RBP16.52■□□□□ 0.24
SSU72-203ENST00000378725 TAF11Q15544 211 aa16.52■□□□□ 0.24
SSU72-203ENST00000378725 C20orf196Q8IYI0 205 aa16.52■□□□□ 0.24
SSU72-203ENST00000378725 ZNF433Q8N7K0 673 aaPredicted RBP16.52■□□□□ 0.24
SSU72-203ENST00000378725 USB1Q9BQ65 265 aaKnown RBP16.52■□□□□ 0.24
SSU72-203ENST00000378725 TXNIPQ9H3M7 391 aa16.52■□□□□ 0.24
SSU72-203ENST00000378725 NTN4Q9HB63 628 aa16.52■□□□□ 0.24
SSU72-203ENST00000378725 RPL36A-HNRNPH2H7BZ11 118 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 HNRNPRO43390 633 aaKnown RBP16.51■□□□□ 0.23
SSU72-203ENST00000378725 TIPRLO75663 272 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 IGHMP01871 453 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 ITGA5P08648 1049 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 COX6B1P14854 86 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 PPP3CBP16298 524 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 MPGP29372 298 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 KIR2DL3P43628 341 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 DAP3P51398 398 aaKnown RBP16.51■□□□□ 0.23
SSU72-203ENST00000378725 IST1P53990 364 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 FOXG1P55316 489 aaPredicted RBP16.51■□□□□ 0.23
SSU72-203ENST00000378725 FXYD6P3P58550 94 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 CTXN1P60606 82 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 LGALS3BPQ08380 585 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 ACKR1Q16570 336 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 ARMC4Q5T2S8 1044 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 HIST2H2BCQ6DN03 193 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 LINGO2Q7L985 606 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 ABHD12BQ7Z5M8 362 aaPredicted RBP16.51■□□□□ 0.23
SSU72-203ENST00000378725 TMEM179BQ7Z7N9 219 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 STEAP2Q8NFT2 490 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 OR9Q2Q8NGE9 314 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 LINC01560Q8TB33 94 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 KISS1RQ969F8 398 aaPredicted RBP16.51■□□□□ 0.23
SSU72-203ENST00000378725 SLC25A44Q96H78 314 aaPredicted RBP16.51■□□□□ 0.23
SSU72-203ENST00000378725 BOD1Q96IK1 185 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 DACH2Q96NX9 599 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 WFIKKN1Q96NZ8 548 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 DENND2DQ9H6A0 471 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms