RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 A0A1B0GUH1 482 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 SEMA4FO95754 770 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 PDGFAP04085 211 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 ATXN8OSP0DMR3 200 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 MAPK3P27361 379 aaPredicted RBP13.25□□□□□ -0.29
MSH5-201ENST00000375703 RPS15P62841 145 aaKnown RBP13.25□□□□□ -0.29
MSH5-201ENST00000375703 MRPS10P82664 201 aaKnown RBP13.25□□□□□ -0.29
MSH5-201ENST00000375703 RPL6Q02878 288 aaKnown RBP13.25□□□□□ -0.29
MSH5-201ENST00000375703 EIF2B5Q13144 721 aaKnown RBP13.25□□□□□ -0.29
MSH5-201ENST00000375703 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.25□□□□□ -0.29
MSH5-201ENST00000375703 SEZ6L2Q6UXD5 910 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 DND1Q8IYX4 353 aaKnown RBP13.25□□□□□ -0.29
MSH5-201ENST00000375703 PHOSPHO1Q8TCT1 267 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 HMGB4Q8WW32 186 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 MIB2Q96AX9 1013 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 LMF1Q96S06 567 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 SEC22CQ9BRL7 303 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 CLDN16Q9Y5I7 305 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 TCRBV21S2A2A0A5A6 115 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 G3V3Q6 166 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 SRPX2O60687 465 aaPredicted RBP13.25□□□□□ -0.29
MSH5-201ENST00000375703 ADRA2CP18825 462 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 ENPP1P22413 925 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 SDHAP31040 664 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 MRPS21P82921 87 aaKnown RBP13.25□□□□□ -0.29
MSH5-201ENST00000375703 GRK1Q15835 563 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 FAAP20Q6NZ36 180 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 MED25Q71SY5 747 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 ATG4DQ86TL0 474 aaPredicted RBP13.25□□□□□ -0.29
MSH5-201ENST00000375703 ZNF615Q8N8J6 731 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 EXD3Q8N9H8 876 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 LRRC75AQ8NAA5 344 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 LSM14AQ8ND56 463 aaKnown RBP13.25□□□□□ -0.29
MSH5-201ENST00000375703 OR2T4Q8NH00 348 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 CEP76Q8TAP6 659 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 PCNPQ8WW12 178 aaKnown RBP13.25□□□□□ -0.29
MSH5-201ENST00000375703 MARVELD3Q96A59 401 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 ZNF578Q96N58 590 aaPredicted RBP13.25□□□□□ -0.29
MSH5-201ENST00000375703 CCNL2Q96S94 520 aaPredicted RBP13.25□□□□□ -0.29
MSH5-201ENST00000375703 CDCP1Q9H5V8 836 aa13.25□□□□□ -0.29
MSH5-201ENST00000375703 A0A1B0GTH9 108 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 TVP23AA6NH52 213 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 EPOPA6NHQ4 379 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 PRAMEF26H0Y7S4 382 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 ACOT7O00154 380 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 APEHP13798 732 aaKnown RBP13.24□□□□□ -0.29
MSH5-201ENST00000375703 EN2P19622 333 aaPredicted RBP13.24□□□□□ -0.29
MSH5-201ENST00000375703 DCTDP32321 178 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 TSPAN5P62079 268 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 HYAL1Q12794 435 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 CD226Q15762 336 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 GLDNQ6ZMI3 551 aaPredicted RBP13.24□□□□□ -0.29
MSH5-201ENST00000375703 MEIOBQ8N635 442 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 DNAAF1Q8NEP3 725 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 FKRPQ9H9S5 495 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 MGAT4CQ9UBM8 478 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 GRHPRQ9UBQ7 328 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 LAMP5Q9UJQ1 280 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 IKZF2Q9UKS7 526 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 SLC6A5Q9Y345 797 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 BLACEA4D250 179 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 DCTN6O00399 190 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 OIP5O43482 229 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 CFDP00746 253 aaPredicted RBP13.24□□□□□ -0.29
MSH5-201ENST00000375703 MAS1P04201 325 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 TAS2R20P59543 309 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 LINC00303Q3SY05 128 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 TCTE1Q5JU00 501 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 CLLU1Q5K131 121 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 OLFML2AQ68BL7 652 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 CBLN3Q6UW01 205 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 METTL27Q8N6F8 245 aaPredicted RBP13.24□□□□□ -0.29
MSH5-201ENST00000375703 ZDHHC1Q8WTX9 485 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 C15orf40Q8WUR7 153 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 LIPHQ8WWY8 451 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 MMABQ96EY8 250 aaPredicted RBP13.24□□□□□ -0.29
MSH5-201ENST00000375703 RBP7Q96R05 134 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 MMP25Q9NPA2 562 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 UBQLN4Q9NRR5 601 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 ZNF69Q9UC07 566 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 PRODH2Q9UF12 536 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 FBXL3Q9UKT7 428 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 PPIEQ9UNP9 301 aaKnown RBP13.24□□□□□ -0.29
MSH5-201ENST00000375703 ETV7Q9Y603 341 aa13.24□□□□□ -0.29
MSH5-201ENST00000375703 ATG2AQ2TAZ0 1938 aa13.23□□□□□ -0.29
MSH5-201ENST00000375703 TICRRQ7Z2Z1 1910 aa13.23□□□□□ -0.29
MSH5-201ENST00000375703 H7C1C5 153 aa13.23□□□□□ -0.29
MSH5-201ENST00000375703 IFNGR1P15260 489 aa13.23□□□□□ -0.29
MSH5-201ENST00000375703 GABRG2P18507 467 aa13.23□□□□□ -0.29
MSH5-201ENST00000375703 DRD1P21728 446 aa13.23□□□□□ -0.29
MSH5-201ENST00000375703 RAB14P61106 215 aa13.23□□□□□ -0.29
MSH5-201ENST00000375703 LCN6P62502 163 aa13.23□□□□□ -0.29
MSH5-201ENST00000375703 LTBQ06643 244 aa13.23□□□□□ -0.29
MSH5-201ENST00000375703 GRM7Q14831 915 aa13.23□□□□□ -0.29
MSH5-201ENST00000375703 LRRTM1Q86UE6 522 aa13.23□□□□□ -0.29
MSH5-201ENST00000375703 TMPRSS12Q86WS5 348 aa13.23□□□□□ -0.29
MSH5-201ENST00000375703 CDC20BQ86Y33 519 aa13.23□□□□□ -0.29
MSH5-201ENST00000375703 NSMAFQ92636 917 aa13.23□□□□□ -0.29
MSH5-201ENST00000375703 TAS2R5Q9NYW4 299 aa13.23□□□□□ -0.29
MSH5-201ENST00000375703 ANXA2P2A6NMY6 339 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms