RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 SOX8P57073 446 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 ZNF45Q02386 682 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 CRTC2Q53ET0 693 aaPredicted RBP10.9□□□□□ -0.66
USF1-203ENST00000368021 FAM69AQ5T7M9 428 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 ABHD17BQ5VST6 288 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 LRRC17Q8N6Y2 441 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 SETD6Q8TBK2 473 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 SGCDQ92629 289 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 MYDGFQ969H8 173 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 TAAR8Q969N4 342 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 ZBTB8AQ96BR9 441 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 DACH2Q96NX9 599 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 MOGAT1Q96PD6 335 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 GPX7Q96SL4 187 aaPredicted RBP10.9□□□□□ -0.66
USF1-203ENST00000368021 ARHGAP9Q9BRR9 750 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 COPS4Q9BT78 406 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 IFT27Q9BW83 186 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 FN3KQ9H479 309 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 RPRD1BQ9NQG5 326 aaKnown RBP10.9□□□□□ -0.66
USF1-203ENST00000368021 ZC4H2Q9NQZ6 224 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 CMC2Q9NRP2 79 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 FBXL2Q9UKC9 423 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 VDAC3Q9Y277 283 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 RPL36Q9Y3U8 105 aaKnown RBP10.9□□□□□ -0.66
USF1-203ENST00000368021 HRH3Q9Y5N1 445 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 SNX5Q9Y5X3 404 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 CPAMD8Q8IZJ3 1885 aa10.9□□□□□ -0.66
USF1-203ENST00000368021 FAM208BQ5VWN6 2430 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 LRRN3E7EW58 273 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 PRODHO43272 600 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 B3GALNT1O75752 331 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 WISP1O95388 367 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 BGLAPP02818 100 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 P04436 131 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 FKBP2P26885 142 aaKnown RBP10.89□□□□□ -0.67
USF1-203ENST00000368021 RPS5P46782 204 aaKnown RBP10.89□□□□□ -0.67
USF1-203ENST00000368021 NUDT6P53370 316 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 FOXF1Q12946 379 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 C1orf140Q5VVS0 124 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 TIGD3Q6B0B8 471 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 ARHGAP11AQ6P4F7 1023 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 POMZP3Q6PJE2 187 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 DPY19L2P2Q6ZN68 376 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 AHSA2Q719I0 299 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 MDGA2Q7Z553 956 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 SLC22A16Q86VW1 577 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 LSRQ86X29 649 aaPredicted RBP10.89□□□□□ -0.67
USF1-203ENST00000368021 LIX1LQ8IVB5 337 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 PSD4Q8NDX1 1056 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 GGHQ92820 318 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 ZNF582Q96NG8 517 aaPredicted RBP10.89□□□□□ -0.67
USF1-203ENST00000368021 RHNO1Q9BSD3 238 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 PTDSS2Q9BVG9 487 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 AMBNQ9NP70 447 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 DNAJC27Q9NZQ0 273 aa10.89□□□□□ -0.67
USF1-203ENST00000368021 ZC3H12DA2A288 527 aaKnown RBP10.88□□□□□ -0.67
USF1-203ENST00000368021 KDM4EB2RXH2 506 aaPredicted RBP10.88□□□□□ -0.67
USF1-203ENST00000368021 ARPC3O15145 178 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 CDK1P06493 297 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 FAM87AP0C7U9 286 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 APEHP13798 732 aaKnown RBP10.88□□□□□ -0.67
USF1-203ENST00000368021 PCMT1P22061 227 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 UQCRC1P31930 480 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 CASRP41180 1078 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 MASP1P48740 699 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 DSCR4P56555 118 aaPredicted RBP10.88□□□□□ -0.67
USF1-203ENST00000368021 MVKQ03426 396 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 LTBQ06643 244 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 IKZF1Q13422 519 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 LY6DQ14210 128 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 MFSD13AQ14CX5 517 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 INPP5JQ15735 1006 aaPredicted RBP10.88□□□□□ -0.67
USF1-203ENST00000368021 TBR1Q16650 682 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 NXNL2Q5VZ03 156 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 XAF1Q6GPH4 301 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 ZNF227Q86WZ6 799 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 GALNT16Q8N428 558 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 C10orf53Q8N6V4 93 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 OR1J4Q8NGS1 313 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 RFKQ969G6 155 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 DDIT4LQ96D03 193 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 TM9SF2Q99805 663 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 NRIP3Q9NQ35 241 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 B3GNT2Q9NY97 397 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 ERVK-18Q9QC07 812 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 ARGFXA6NJG6 315 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 M0R3G1 203 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 NDUFA2O43678 99 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 NOS1APO75052 506 aaPredicted RBP10.88□□□□□ -0.67
USF1-203ENST00000368021 FZD7O75084 574 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 CBR3O75828 277 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 AHSA1O95433 338 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 HIST1H2ABP04908 130 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 DBTP11182 482 aaKnown RBP10.88□□□□□ -0.67
USF1-203ENST00000368021 ERP29P30040 261 aaKnown RBP10.88□□□□□ -0.67
USF1-203ENST00000368021 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.88□□□□□ -0.67
USF1-203ENST00000368021 AADACL4Q5VUY2 407 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 C3orf33Q6P1S2 294 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 HIST3H2AQ7L7L0 130 aa10.88□□□□□ -0.67
USF1-203ENST00000368021 MAMDC2Q7Z304 686 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms