RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 SLC14A2Q15849 920 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 SLC5A12Q1EHB4 618 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 GLYR1Q49A26 553 aaPredicted RBP12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 BTNL8Q6UX41 500 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 OR13F1Q8NGS4 319 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 C12orf42Q96LP6 360 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 SEMA4CQ9C0C4 833 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 SPACA1Q9HBV2 294 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 KCMF1Q9P0J7 381 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 ZNF629Q9UEG4 869 aaPredicted RBP12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 NDRG3Q9UGV2 375 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 ZNF281Q9Y2X9 895 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 IER3IP1Q9Y5U9 82 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 TP53BP1Q12888 1972 aaPredicted RBP12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 NCBP2LA6PVI3 153 aaKnown RBP12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 HAPLN1P10915 354 aaPredicted RBP12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 SNRPBP14678 240 aaKnown RBP12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 RPL7P18124 248 aaKnown RBP12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 RNLSQ5VYX0 342 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 SLC24A4Q8NFF2 622 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 F2RL3Q96RI0 385 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 EGLN3Q9H6Z9 239 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 SCG5P05408 212 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 SUMF1Q8NBK3 374 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 ZNRF4Q8WWF5 429 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 C12orf10Q9HB07 376 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 MED1Q15648 1581 aaPredicted RBP12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 RAF1P04049 648 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 GYPBP06028 91 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 SPP1P10451 314 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 ILKQ13418 452 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 PLAC9Q5JTB6 97 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 VSX1Q9NZR4 365 aaPredicted RBP12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 DOCK10Q96BY6 2186 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 KDM4FA0A1W2PPD8 638 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 G3V2L1 256 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 EMP2P54851 167 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 OPN5Q6U736 354 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 ZNF322Q6U7Q0 402 aaPredicted RBP12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 MEPCEQ7L2J0 689 aaKnown RBP12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 LGALS14Q8TCE9 139 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 CD200R1Q8TD46 325 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 ZFYVE21Q9BQ24 234 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 PARP12Q9H0J9 701 aaKnown RBP12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 COL1A1P02452 1464 aaPredicted RBP12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 A0A0J9YY10 115 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 ALPLP05186 524 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 HNRNPA2B1P22626 353 aaKnown RBP12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 CARD18P57730 90 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 ERVPABLB-1P60509 514 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 SLC7A9P82251 487 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 DOC2AQ14183 400 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 SMN1Q16637 294 aaKnown RBP12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 VAMP8Q9BV40 100 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 NUDT21O43809 227 aaKnown RBP12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 TIMM8AO60220 97 aaPredicted RBP12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 EIF1P41567 113 aaKnown RBP12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 CST6Q15828 149 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 Q6ZRG5 221 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 GNG12Q9UBI6 72 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 SH3BGRL2Q9UJC5 107 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 UBL3O95164 117 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 ENPP1P22413 925 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 AADACP22760 399 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 ZNF91Q05481 1191 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 TOR2AQ5JU69 321 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 WDR88Q6ZMY6 472 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 MON2Q7Z3U7 1717 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 OR14A16Q8NHC5 309 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 KIF26BQ2KJY2 2108 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 ADAM23O75077 832 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 CHRM4P08173 479 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 DSC1Q08554 894 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 SLC7A6Q92536 515 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 MRGPRX2Q96LB1 330 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 SLC17A9Q9BYT1 436 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 INIPQ9NRY2 104 aa12.3□□□□□ -0.44
SRGAP3-201ENST00000360413 NME2P1O60361 137 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 C3orf38Q5JPI3 329 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 HSD17B11Q8NBQ5 300 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 FER1L6-AS2Q96M78 137 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 ATP13A2Q9NQ11 1180 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 GOLT1BQ9Y3E0 138 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 VIPR2P41587 438 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 PLK5Q496M5 336 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 DCAF12Q5T6F0 453 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 CNIH1O95406 144 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 DBHP09172 617 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 GABRA2P47869 451 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 P2RX3P56373 397 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 RPS25P62851 125 aaKnown RBP12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 CLDN22Q8N7P3 220 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 MBOAT4Q96T53 435 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 SLC25A32Q9H2D1 315 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 SPTA1P02549 2419 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 CACNA1SQ13698 1873 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 NSG1A0A0A6YYJ2 146 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 A0A0D9SEW6 157 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 ZNF724A8MTY0 619 aa12.29□□□□□ -0.44
SRGAP3-201ENST00000360413 SFTPDP35247 375 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms