RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 EMC6Q9BV81 110 aa16.95■□□□□ 0.3
HLA-DRB1-201ENST00000360004 HDHD5Q9BXW7 423 aa16.95■□□□□ 0.3
HLA-DRB1-201ENST00000360004 TAS2R5Q9NYW4 299 aa16.95■□□□□ 0.3
HLA-DRB1-201ENST00000360004 GPR52Q9Y2T5 361 aa16.95■□□□□ 0.3
HLA-DRB1-201ENST00000360004 LYVE1Q9Y5Y7 322 aa16.95■□□□□ 0.3
HLA-DRB1-201ENST00000360004 U3KQV3 271 aa16.95■□□□□ 0.3
HLA-DRB1-201ENST00000360004 ICE1Q9Y2F5 2266 aa16.95■□□□□ 0.3
HLA-DRB1-201ENST00000360004 UNC119BA6NIH7 251 aa16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 ZNF587BE7ETH6 402 aa16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 CLOCKO15516 846 aa16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 HNRNPRO43390 633 aaKnown RBP16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 LYZL6O75951 148 aa16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 EDNRAP25101 427 aa16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 DAP3P51398 398 aaKnown RBP16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 ITGADQ13349 1161 aa16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 TOP3AQ13472 1001 aaPredicted RBP16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 MELKQ14680 651 aa16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 TSPO2Q5TGU0 170 aa16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 C9orf135Q5VTT2 229 aa16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 FBXW10Q5XX13 1052 aa16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 HMBOX1Q6NT76 420 aa16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 TMPRSS11FQ6ZWK6 438 aa16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 BHLHA15Q7RTS1 189 aaPredicted RBP16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 GABRG1Q8N1C3 465 aa16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 MOSPD2Q8NHP6 518 aa16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 LINC01560Q8TB33 94 aa16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 LIPHQ8WWY8 451 aa16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 ZC3HAV1LQ96H79 300 aaKnown RBP16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 ADAD1Q96M93 576 aaKnown RBP16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 ENKD1Q9H0I2 346 aa16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 SLC7A10Q9NS82 523 aa16.94■□□□□ 0.3
HLA-DRB1-201ENST00000360004 SH3D21A4FU49 640 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 SLC35F4A4IF30 521 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 CDH2P19022 906 aaPredicted RBP16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 HOXC12P31275 282 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 NTF4P34130 210 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 PRPS1P60891 318 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 TGFBR3Q03167 851 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 PPP1R8Q12972 351 aaKnown RBP16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 CAMK2DQ13557 499 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 LAPTM4AQ15012 233 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 TSC22D1Q15714 1073 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 STK11Q15831 433 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 ZBED5Q49AG3 693 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 SFRP5Q5T4F7 317 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 STAC2Q6ZMT1 411 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 GNPDA2Q8TDQ7 276 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 MARVELD3Q96A59 401 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 TXNDC15Q96J42 360 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 ALKBH3Q96Q83 286 aaPredicted RBP16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 OR2M2Q96R28 347 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 TNFRSF13CQ96RJ3 184 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 ACTR6Q9GZN1 396 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 CCM2LQ9NUG4 571 aaPredicted RBP16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 MALT1Q9UDY8 824 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 HIF3AQ9Y2N7 669 aa16.93■□□□□ 0.3
HLA-DRB1-201ENST00000360004 M0R3G1 203 aa16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 RAD51DO75771 328 aa16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 PPP3CBP16298 524 aa16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 PSMB1P20618 241 aaKnown RBP16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 OMPP47874 163 aa16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 CSNK1A1P48729 337 aa16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 ARHGDIAP52565 204 aa16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 CLRN1P58418 232 aa16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 CTXN1P60606 82 aa16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 ZNF787Q6DD87 383 aa16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 YTHDF3Q7Z739 585 aaKnown RBP16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 IGFN1Q86VF2 1251 aa16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 C10orf67Q8IYJ2 551 aa16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 FAM222BQ8WU58 562 aa16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 POLDIP3Q9BY77 421 aaKnown RBP16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 ZNF226Q9NYT6 803 aa16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 TAS2R16Q9NYV7 291 aa16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 CRIM1Q9NZV1 1036 aa16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 STX18Q9P2W9 335 aaKnown RBP16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 UTP20O75691 2785 aaKnown RBP16.92■□□□□ 0.3
HLA-DRB1-201ENST00000360004 CDC42EP2O14613 210 aa16.91■□□□□ 0.3
HLA-DRB1-201ENST00000360004 DEAF1O75398 565 aaPredicted RBP16.91■□□□□ 0.3
HLA-DRB1-201ENST00000360004 NDUFB2O95178 105 aa16.91■□□□□ 0.3
HLA-DRB1-201ENST00000360004 IGFBP2P18065 325 aa16.91■□□□□ 0.3
HLA-DRB1-201ENST00000360004 IGHV1-2P23083 117 aa16.91■□□□□ 0.3
HLA-DRB1-201ENST00000360004 PCYT1AP49585 367 aa16.91■□□□□ 0.3
HLA-DRB1-201ENST00000360004 GK3PQ14409 553 aa16.91■□□□□ 0.3
HLA-DRB1-201ENST00000360004 KLHL24Q6TFL4 600 aa16.91■□□□□ 0.3
HLA-DRB1-201ENST00000360004 FANK1Q8TC84 345 aa16.91■□□□□ 0.3
HLA-DRB1-201ENST00000360004 ZNF566Q969W8 418 aa16.91■□□□□ 0.3
HLA-DRB1-201ENST00000360004 S100PBPQ96BU1 408 aa16.91■□□□□ 0.3
HLA-DRB1-201ENST00000360004 USB1Q9BQ65 265 aaKnown RBP16.91■□□□□ 0.3
HLA-DRB1-201ENST00000360004 ULBP2Q9BZM5 246 aa16.91■□□□□ 0.3
HLA-DRB1-201ENST00000360004 LINC00470Q9BZP3 86 aa16.91■□□□□ 0.3
HLA-DRB1-201ENST00000360004 DNAJB9Q9UBS3 223 aa16.91■□□□□ 0.3
HLA-DRB1-201ENST00000360004 KCNN3Q9UGI6 736 aa16.91■□□□□ 0.3
HLA-DRB1-201ENST00000360004 PTPN13Q12923 2485 aa16.91■□□□□ 0.3
HLA-DRB1-201ENST00000360004 COL12A1Q99715 3063 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 UPK3AO75631 287 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 TIPRLO75663 272 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 IGHG1P01857 330 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 FPR3P25089 353 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 MPGP29372 298 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 HMGA2P52926 109 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms