RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 GPX2P18283 190 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 PSMB6P28072 239 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 FOXK2Q01167 660 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 IAH1Q2TAA2 248 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-203ENST00000358544 C4orf17Q53FE4 359 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 COX20Q5RI15 118 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 FAM180BQ6P0A1 224 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 TMEM18Q96B42 140 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF689Q96CS4 500 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-203ENST00000358544 PACRGQ96M98 296 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-203ENST00000358544 SLC25A37Q9NYZ2 338 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 STEAP1Q9UHE8 339 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 ACHEP22303 614 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 GABRA2P47869 451 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 CLCNKAP51800 687 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 UPP1Q16831 310 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 Q499Y3 187 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 Q6ZRG5 221 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 OR2G3Q8NGZ4 309 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 C5AR2Q9P296 337 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 PCDHB10Q9UN67 800 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 MDFIC2A0A1B0GVS7 189 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 SUMO1P63165 101 aaKnown RBP5.64□□□□□ -1.51
VPS13B-203ENST00000358544 ACSM1Q08AH1 577 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 ALG10BQ5I7T1 473 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 OR1S2Q8NGQ3 325 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 OR13C8Q8NGS7 320 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 OR13C5Q8NGS8 318 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 TANKQ92844 425 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 EVA1AQ9H8M9 152 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 SDHAF3Q9NRP4 125 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 A0A1B0GV90 55 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 CSTAP01040 98 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 IL5P05113 134 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 TPPP2P59282 170 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 ANKRD16Q6P6B7 361 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 Q6ZVU0 165 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 OR14L1PQ8NHC6 308 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF75AQ96N20 296 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 SYT3Q9BQG1 590 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 CLSTN3Q9BQT9 956 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 ACER3Q9NUN7 267 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 FASNP49327 2511 aaKnown RBP5.64□□□□□ -1.51
VPS13B-203ENST00000358544 TCRBV16S1A1N1A0A5B0 115 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 SERPINA5P05154 406 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 SOX18P35713 384 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 HNRNPA3P51991 378 aaKnown RBP5.64□□□□□ -1.51
VPS13B-203ENST00000358544 IFITM3Q01628 133 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 TLE4Q04727 773 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 ALKBH1Q13686 389 aaKnown RBP5.64□□□□□ -1.51
VPS13B-203ENST00000358544 PCK2Q16822 640 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 DUSP18Q8NEJ0 188 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 TBC1D20Q96BZ9 403 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 PHYHIPLQ96FC7 376 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 CABLES2Q9BTV7 478 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 TMEFF2Q9UIK5 374 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-203ENST00000358544 MTMR11A4FU01 709 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 ATXN1LP0C7T5 689 aaKnown RBP5.64□□□□□ -1.51
VPS13B-203ENST00000358544 EPXP11678 715 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 CTSEP14091 401 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 NDUFS1P28331 727 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 TSPAN31Q12999 210 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 ARHGAP11BQ3KRB8 267 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 OVCH1Q7RTY7 1134 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 NUP43Q8NFH3 380 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 NICN1Q9BSH3 213 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 RSRP1Q9BUV0 290 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 ABT1Q9ULW3 272 aaKnown RBP5.64□□□□□ -1.51
VPS13B-203ENST00000358544 MUC6Q6W4X9 2439 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 GNRH1P01148 92 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 HPNP05981 417 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 GDI1P31150 447 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 HAAOP46952 286 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 PJVKQ0ZLH3 352 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 SBSNQ6UWP8 590 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 OR9A2Q8NGT5 310 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 LKAAEAR1Q8TD35 194 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 NEURL3Q96EH8 262 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF681Q96N22 645 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 TAF9BQ9HBM6 251 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 SIRT7Q9NRC8 400 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 MMP26Q9NRE1 261 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 CBLCQ9ULV8 474 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 HHLA2Q9UM44 414 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 HIDE1A8MVS5 230 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 RAB5AP20339 215 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 GABRR2P28476 465 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 SLC6A11P48066 632 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 MPEG1Q2M385 716 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 PRAMEF19Q5SWL8 479 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 GATSQ8NAP1 163 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 TMEM239Q8WW34 195 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 PIGQQ9BRB3 760 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 LDAHQ9H6V9 325 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 PLEKHB1Q9UF11 243 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF443Q9Y2A4 671 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-203ENST00000358544 SCDO00767 359 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 TACR1P25103 407 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 GRM7Q14831 915 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 SLC22A6Q4U2R8 563 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms