RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 CDCA4Q9BXL8 241 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 MCOLN1Q9GZU1 580 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 NDRG4Q9ULP0 352 aaKnown RBP10.86□□□□□ -0.67
COL9A1-202ENST00000357250 PLEKHM1Q9Y4G2 1056 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 LRIT2A6NDA9 550 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 PLPP1O14494 284 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 PAPLNO95428 1278 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 ATP1B1P05026 303 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 CHRM4P08173 479 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 NID1P14543 1247 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 TAS2R30P59541 319 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 SEC61A1P61619 476 aaKnown RBP10.86□□□□□ -0.67
COL9A1-202ENST00000357250 ZNF77Q15935 545 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 COX20Q5RI15 118 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 LYPD4Q6UWN0 246 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 LAX1Q8IWV1 398 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 NANOGP1Q8N7R0 232 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 PRMT8Q9NR22 394 aaPredicted RBP10.86□□□□□ -0.67
COL9A1-202ENST00000357250 CPNE6O95741 557 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 ZNF44P15621 663 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 MAOBP27338 520 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 BCL6P41182 706 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 IDH3GP51553 393 aaPredicted RBP10.85□□□□□ -0.67
COL9A1-202ENST00000357250 CCR9P51686 369 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 AFF3P51826 1226 aaKnown RBP10.85□□□□□ -0.67
COL9A1-202ENST00000357250 RACK1P63244 317 aaKnown RBP10.85□□□□□ -0.67
COL9A1-202ENST00000357250 BDH1Q02338 343 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 SLC14A1Q13336 389 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 MFAP5Q13361 173 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 SLC22A25Q6T423 547 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 OVCH1Q7RTY7 1134 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 LGALS14Q8TCE9 139 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 TSSK2Q96PF2 358 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 NIPSNAP1Q9BPW8 284 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 NMNAT2Q9BZQ4 307 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 SEMA4CQ9C0C4 833 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 BCL2L10Q9HD36 194 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 C19orf12Q9NSK7 152 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 RAB22AQ9UL26 194 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 A0A1B0GTW7 788 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 TMEM221A6NGB7 291 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 H7C1Q1 480 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 SURF4O15260 269 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 HBE1P02100 147 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 RRADP55042 308 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 ZP2Q05996 745 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 TNK1Q13470 666 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 ZMAT1Q5H9K5 638 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 EMC4Q5J8M3 183 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 MED25Q71SY5 747 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 COX15Q7KZN9 410 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 AAED1Q7RTV5 226 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 FAM109AQ8N4B1 249 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 STEAP1Q9UHE8 339 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 PCDHGA6Q9Y5G7 932 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 MICAL3Q7RTP6 2002 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 LRP5LA4QPB2 252 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 SNRPBP14678 240 aaKnown RBP10.85□□□□□ -0.67
COL9A1-202ENST00000357250 TEAD1P28347 426 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 IHHQ14623 411 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 KCNJ8Q15842 424 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 TMEM176BQ3YBM2 270 aaPredicted RBP10.85□□□□□ -0.67
COL9A1-202ENST00000357250 SLC36A2Q495M3 483 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 MEX3BQ6ZN04 569 aaKnown RBP10.85□□□□□ -0.67
COL9A1-202ENST00000357250 IDO2Q6ZQW0 420 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 MOB3CQ70IA8 216 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 ANKRD33Q7Z3H0 272 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 NUDT8Q8WV74 236 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 SGK3Q96BR1 496 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 FAM212BQ9NTI7 297 aaPredicted RBP10.85□□□□□ -0.67
COL9A1-202ENST00000357250 VSX1Q9NZR4 365 aaPredicted RBP10.85□□□□□ -0.67
COL9A1-202ENST00000357250 DOCK5Q9H7D0 1870 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 TRBV5-4A0A0C4DH59 114 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 ACOD1A6NK06 481 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 PMS2P2O95744 297 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 TCRBP04435 133 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 PRPH2P23942 346 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 MMP11P24347 488 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 ELAVL1Q15717 326 aaKnown RBP10.85□□□□□ -0.67
COL9A1-202ENST00000357250 FCRL6Q6DN72 434 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 TBPL2Q6SJ96 375 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 FAM57BQ71RH2 274 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 GRINAQ7Z429 371 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 CD163Q86VB7 1156 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 DUSP19Q8WTR2 217 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 ZNF419Q96HQ0 510 aaPredicted RBP10.85□□□□□ -0.67
COL9A1-202ENST00000357250 PIGQQ9BRB3 760 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 SGPP1Q9BX95 441 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 MYEF2Q9P2K5 600 aaKnown RBP10.85□□□□□ -0.67
COL9A1-202ENST00000357250 NUMBLQ9Y6R0 609 aa10.85□□□□□ -0.67
COL9A1-202ENST00000357250 RAB19A4D1S5 217 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 MCRIP1C9JLW8 97 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 DBHP09172 617 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 SERPINA2P20848 420 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 CD27P26842 260 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 IL2RGP31785 369 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 TRIM23P36406 574 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 GRB2P62993 217 aaKnown RBP10.84□□□□□ -0.67
COL9A1-202ENST00000357250 ARHGAP11BQ3KRB8 267 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 DCAF12Q5T6F0 453 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms