RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 OR2G3Q8NGZ4 309 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 TUBB1Q9H4B7 451 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 UBQLN4Q9NRR5 601 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 NUMBLQ9Y6R0 609 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 MYH13Q9UKX3 1938 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 TRAV20A0A0B4J274 112 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 HMX2A2RU54 273 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 ANKRD30BLA7E2S9 258 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 C17orf105B2RV13 164 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 DUX1O43812 170 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 H2AFB1P0C5Y9 115 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 C5AR1P21730 350 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 MSX1P28360 303 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 FABP6P51161 128 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 BAMBIQ13145 260 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 CAMK2BQ13554 666 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 HNF4GQ14541 408 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 PKDCCQ504Y2 493 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 CD99L2Q8TCZ2 262 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 LILRB3O75022 631 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 LGI1O95970 557 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 IGHG1P01857 330 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 DBHP09172 617 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 AADACP22760 399 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 DPP4P27487 766 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 SNCAP37840 140 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 COX20Q5RI15 118 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 RIMKLAQ8IXN7 391 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 ABHD5Q8WTS1 349 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 C1QTNF3Q9BXJ4 246 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 PRSS16Q9NQE7 514 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 CHRNA9Q9UGM1 479 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 OR5H14A6NHG9 310 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 KDM4EB2RXH2 506 aaPredicted RBP11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 SLC19A1P41440 591 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 CATR1Q13166 79 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 PLCXD3Q63HM9 321 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 TRNP1Q6NT89 227 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 DBX2Q6ZNG2 339 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 FJX1Q86VR8 437 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 PRSS35Q8N3Z0 413 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 DCTN6O00399 190 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 PMP2P02689 132 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 IRF2P14316 349 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 MMP11P24347 488 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 OR2B8PP59922 312 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 FAM185AQ8N0U4 392 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 CPT1CQ8TCG5 803 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 OR5B2Q96R09 309 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 TOLLIPQ9H0E2 274 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 SLC6A17Q9H1V8 727 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 ZMAT5Q9UDW3 170 aaKnown RBP11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 ZAR1LA6NP61 321 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 CHRM2P08172 466 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 MAKP20794 623 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 RAD52P43351 418 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 RAB11AP62491 216 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 GPM6BQ13491 265 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 CTF1Q16619 201 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 CLEC9AQ6UXN8 241 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 CCDC190Q86UF4 302 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 SFT2D1Q8WV19 159 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 TMED6Q8WW62 240 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 IL1F10Q8WWZ1 152 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 NKX3-1Q99801 234 aaPredicted RBP11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 UBQLN3Q9H347 655 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 C1orf198Q9H425 327 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 OPA3Q9H6K4 179 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 KCNIP2Q9NS61 270 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 H3BML4 177 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 J3QR89 54 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 BLVRBP30043 206 aaPredicted RBP11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 UBXN2BQ14CS0 331 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 SHEQ5VZ18 495 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 ZNF620Q6ZNG0 422 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 HSD11B1LQ7Z5J1 315 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 LRRTM3Q86VH5 581 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 TMEM18Q96B42 140 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 BSCL2Q96G97 398 aaPredicted RBP11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 LPAR4Q99677 370 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 CXorf36Q9H7Y0 433 aa11.77□□□□□ -0.52
SYNCRIP-201ENST00000355238 MYO10Q9HD67 2058 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 UNCXA6NJT0 531 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 H7BYZ3 331 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 SPNP16150 400 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 PTAFRP25105 342 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 PSMB6P28072 239 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 UBE2NP61088 152 aaKnown RBP11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 RANP62826 216 aaKnown RBP11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 CST6Q15828 149 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 TMEM184AQ6ZMB5 413 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 PRICKLE2Q7Z3G6 844 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR13C8Q8NGS7 320 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 BRI3BPQ8WY22 251 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 MR1Q95460 341 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 CSNK1G1Q9HCP0 422 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 HRASLSQ9HDD0 168 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 A0A0U1RQS6 177 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 TCRBV5S1A1TA0A578 114 aa11.77□□□□□ -0.53
SYNCRIP-201ENST00000355238 ZNF724A8MTY0 619 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms