RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 A1L4Q6 167 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 LRRN3E7EW58 273 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 C11orf98E9PRG8 122 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 C16orf97H3BN30 126 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 SLC43A1O75387 559 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 CCNB2O95067 398 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 BCL10O95999 233 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 RNF224P0DH78 156 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 CD79BP40259 229 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 DAP3P51398 398 aaKnown RBP10.49□□□□□ -0.73
SNCA-202ENST00000345009 CLDN17P56750 224 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 ACTR3P61158 418 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 SORDQ00796 357 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 POU3F1Q03052 451 aaPredicted RBP10.49□□□□□ -0.73
SNCA-202ENST00000345009 TGFBR3Q03167 851 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 ZBED5Q49AG3 693 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 FBXW9Q5XUX1 488 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 ZFP1Q6P2D0 407 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 Q6ZT83 130 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 SLC46A3Q7Z3Q1 461 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 EPHX4Q8IUS5 362 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 OR51A7Q8NH64 312 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 GNPDA2Q8TDQ7 276 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 BDH2Q9BUT1 245 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 B3GAT2Q9NPZ5 323 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 INIPQ9NRY2 104 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 ARMC1Q9NVT9 282 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 ASB6Q9NWX5 421 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 TAS2R5Q9NYW4 299 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 PLEKHB1Q9UF11 243 aaPredicted RBP10.49□□□□□ -0.73
SNCA-202ENST00000345009 NDRG3Q9UGV2 375 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 HIF3AQ9Y2N7 669 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 LYVE1Q9Y5Y7 322 aa10.49□□□□□ -0.73
SNCA-202ENST00000345009 UTP20O75691 2785 aaKnown RBP10.49□□□□□ -0.73
SNCA-202ENST00000345009 HECTD1Q9ULT8 2610 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 UNC119BA6NIH7 251 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 MCIDASD6RGH6 385 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 CLOCKO15516 846 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 PIP5K1CO60331 668 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 SERPINI2O75830 405 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 NR2C1P13056 603 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 IFNGR1P15260 489 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 PPP3CBP16298 524 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 MAKP20794 623 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 FASP25445 335 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 DNAJA1P31689 397 aaKnown RBP10.48□□□□□ -0.73
SNCA-202ENST00000345009 RPL4P36578 427 aaKnown RBP10.48□□□□□ -0.73
SNCA-202ENST00000345009 AQP2P41181 271 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 ERFP50548 548 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 RPL18Q07020 188 aaKnown RBP10.48□□□□□ -0.73
SNCA-202ENST00000345009 ITGADQ13349 1161 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 SEC23BQ15437 767 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 CDSNQ15517 529 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 MICAQ29983 383 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 ALG10Q5BKT4 473 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 SP5Q6BEB4 398 aaPredicted RBP10.48□□□□□ -0.73
SNCA-202ENST00000345009 RPL13AP3Q6NVV1 102 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 NIPAL3Q6P499 406 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 ZNF474Q6S9Z5 364 aaPredicted RBP10.48□□□□□ -0.73
SNCA-202ENST00000345009 SLC35D2Q76EJ3 337 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 SSX8Q7RTT4 187 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 GPR137CQ8N3F9 429 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 ZIC4Q8N9L1 334 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 STEAP2Q8NFT2 490 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 UTP4Q969X6 686 aaKnown RBP10.48□□□□□ -0.73
SNCA-202ENST00000345009 DUS3LQ96G46 650 aaKnown RBP10.48□□□□□ -0.73
SNCA-202ENST00000345009 FAM46AQ96IP4 442 aaKnown RBP10.48□□□□□ -0.73
SNCA-202ENST00000345009 ZNF385AQ96PM9 386 aaKnown RBP10.48□□□□□ -0.73
SNCA-202ENST00000345009 FUZQ9BT04 418 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 SLCO5A1Q9H2Y9 848 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 GALNT8Q9NY28 637 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 B3GAT1Q9P2W7 334 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 SEC14L4Q9UDX3 406 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 GPR52Q9Y2T5 361 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 U3KQV3 271 aa10.48□□□□□ -0.73
SNCA-202ENST00000345009 TUBAL3A6NHL2 446 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 ZNF587BE7ETH6 402 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 CASKO14936 926 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 TRAF3IP2O43734 574 aaPredicted RBP10.47□□□□□ -0.73
SNCA-202ENST00000345009 NDUFB2O95178 105 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 CLDN1O95832 211 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 HPRP00739 348 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 ADAP00813 363 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 COX6B1P14854 86 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 GSTM3P21266 225 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 IL32P24001 234 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 FPR3P25089 353 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 UGT2B10P36537 528 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 GPR4P46093 362 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 OMPP47874 163 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 LIMS1P48059 325 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 TFF3Q07654 80 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 CCNIQ14094 377 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 KPNB1Q14974 876 aaKnown RBP10.47□□□□□ -0.73
SNCA-202ENST00000345009 LCE2AQ5TA79 106 aaPredicted RBP10.47□□□□□ -0.73
SNCA-202ENST00000345009 FAM205BPQ63HN1 556 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 OR7E24Q6IFN5 339 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 HMBOX1Q6NT76 420 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 C1orf94Q6P1W5 598 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 ZER1Q7Z7L7 766 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms