RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 LIPNQ5VXI9 398 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 STAC2Q6ZMT1 411 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 CDC20BQ86Y33 519 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 OR5AK2Q8NH90 309 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 ZNF431Q8TF32 576 aaPredicted RBP13.24□□□□□ -0.29
TDP2-201ENST00000341060 SLC46A1Q96NT5 459 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 SLC38A3Q99624 504 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 CDX2Q99626 313 aaPredicted RBP13.24□□□□□ -0.29
TDP2-201ENST00000341060 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.24□□□□□ -0.29
TDP2-201ENST00000341060 NXF5Q9H1B4 397 aaKnown RBP13.24□□□□□ -0.29
TDP2-201ENST00000341060 LANCL2Q9NS86 450 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 SOHLH2Q9NX45 425 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 EMC3Q9P0I2 261 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 GRHPRQ9UBQ7 328 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 MGAT4AQ9UM21 535 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 KLHDC2Q9Y2U9 406 aa13.24□□□□□ -0.29
TDP2-201ENST00000341060 A0A087WV48 116 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 IGHV5-51A0A0C4DH38 117 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 TLCD2A6NGC4 264 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 GPR171O14626 319 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 MBTPS2O43462 519 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 SULT1B1O43704 296 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 RPP14O95059 124 aaKnown RBP13.23□□□□□ -0.29
TDP2-201ENST00000341060 UTS2O95399 124 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 CALCBP10092 127 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 GFERP55789 205 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 LTBQ06643 244 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 MESTQ5EB52 335 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 PWWP2BQ6NUJ5 590 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 FCRLAQ7L513 359 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 NANOGNBQ7Z5D8 188 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 LUZP2Q86TE4 346 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 ZNF321PQ8N8H1 164 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 ZNF524Q96C55 264 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 TSPAN32Q96QS1 320 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 IRF2BPLQ9H1B7 796 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 PDE7BQ9NP56 450 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 FRRS1LQ9P0K9 344 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 KLHL9Q9P2J3 617 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 RCE1Q9Y256 329 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 MUC3AQ02505 3323 aa13.23□□□□□ -0.29
TDP2-201ENST00000341060 A0A1B0GVI7 797 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 FRG2CA6NGY1 282 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 PEX14O75381 377 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 RAB40ALP0C0E4 278 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 GLULP15104 373 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 CCR9P51686 369 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 AP3S2P59780 193 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 ZBTB37Q5TC79 503 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 LYPD8Q6UX82 237 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 OR11G2Q8NGC1 345 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 OR2T4Q8NH00 348 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 RAB40AQ8WXH6 277 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 GCDHQ92947 438 aaPredicted RBP13.22□□□□□ -0.29
TDP2-201ENST00000341060 KTI12Q96EK9 354 aaPredicted RBP13.22□□□□□ -0.29
TDP2-201ENST00000341060 ADAD1Q96M93 576 aaKnown RBP13.22□□□□□ -0.29
TDP2-201ENST00000341060 CHRNA10Q9GZZ6 450 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 SLITRK2Q9H156 845 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 C12orf10Q9HB07 376 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 TCF7L1Q9HCS4 588 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 OR5V1Q9UGF6 321 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 CACNA1CQ13936 2221 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 MEIKINA0A087WXM9 373 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 TRBV5-5A0A0J9YX44 114 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 NAP1L6A6NFF2 107 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 NME1P15531 152 aaKnown RBP13.22□□□□□ -0.29
TDP2-201ENST00000341060 PTH2RP49190 550 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 CLDN12P56749 244 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 C19orf57Q0VDD7 668 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 GRM7Q14831 915 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 BEST4Q8NFU0 473 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 OR11H4Q8NGC9 324 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 OR52I2Q8NH67 350 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 ZNF563Q8TA94 476 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 SYNPRQ8TBG9 265 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 CLIP3Q96DZ5 547 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 S100A16Q96FQ6 103 aaKnown RBP13.22□□□□□ -0.29
TDP2-201ENST00000341060 MS4A3Q96HJ5 214 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 TGM7Q96PF1 710 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 ADAM19Q9H013 955 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 SPRTNQ9H040 489 aaPredicted RBP13.22□□□□□ -0.29
TDP2-201ENST00000341060 SRA1Q9HD15 236 aaKnown RBP13.22□□□□□ -0.29
TDP2-201ENST00000341060 HRASLSQ9HDD0 168 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 PNO1Q9NRX1 252 aaKnown RBP13.22□□□□□ -0.29
TDP2-201ENST00000341060 MRTO4Q9UKD2 239 aaKnown RBP13.22□□□□□ -0.29
TDP2-201ENST00000341060 FOXJ3Q9UPW0 622 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 MMACHCQ9Y4U1 282 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 ALPK2Q86TB3 2170 aa13.22□□□□□ -0.29
TDP2-201ENST00000341060 H7C1C5 153 aa13.21□□□□□ -0.29
TDP2-201ENST00000341060 KHNYNO15037 678 aaKnown RBP13.21□□□□□ -0.29
TDP2-201ENST00000341060 GMDSO60547 372 aa13.21□□□□□ -0.29
TDP2-201ENST00000341060 KRT33AO76009 404 aa13.21□□□□□ -0.29
TDP2-201ENST00000341060 SYPP08247 313 aa13.21□□□□□ -0.29
TDP2-201ENST00000341060 SDHBP21912 280 aa13.21□□□□□ -0.29
TDP2-201ENST00000341060 TACR3P29371 465 aa13.21□□□□□ -0.29
TDP2-201ENST00000341060 RORAP35398 523 aa13.21□□□□□ -0.29
TDP2-201ENST00000341060 LCN6P62502 163 aa13.21□□□□□ -0.29
TDP2-201ENST00000341060 MRPS10P82664 201 aaKnown RBP13.21□□□□□ -0.29
TDP2-201ENST00000341060 TMEM255AQ5JRV8 349 aa13.21□□□□□ -0.29
TDP2-201ENST00000341060 ELFN2Q5R3F8 820 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms