RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 DCTN2Q13561 401 aaKnown RBP16.06■□□□□ 0.16
RAB39A-201ENST00000320578 INPP5JQ15735 1006 aaPredicted RBP16.06■□□□□ 0.16
RAB39A-201ENST00000320578 MS4A18Q3C1V0 323 aa16.06■□□□□ 0.16
RAB39A-201ENST00000320578 ZBTB46Q86UZ6 589 aa16.06■□□□□ 0.16
RAB39A-201ENST00000320578 ATP6V1C2Q8NEY4 427 aa16.06■□□□□ 0.16
RAB39A-201ENST00000320578 OR1J4Q8NGS1 313 aa16.06■□□□□ 0.16
RAB39A-201ENST00000320578 NKD1Q969G9 470 aa16.06■□□□□ 0.16
RAB39A-201ENST00000320578 LRFN3Q9BTN0 628 aa16.06■□□□□ 0.16
RAB39A-201ENST00000320578 MARCH7Q9H992 704 aa16.06■□□□□ 0.16
RAB39A-201ENST00000320578 PLGRKTQ9HBL7 147 aa16.06■□□□□ 0.16
RAB39A-201ENST00000320578 TEKT2Q9UIF3 430 aa16.06■□□□□ 0.16
RAB39A-201ENST00000320578 PRSS37A4D1T9 235 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 METTL15A6NJ78 407 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 CDRT15L2A8MXV6 281 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 SEC14L5O43304 696 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 P04436 131 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 HLA-DPB1P04440 258 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 MRPL3P09001 348 aaKnown RBP16.05■□□□□ 0.16
RAB39A-201ENST00000320578 TFPIP10646 304 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 AHCYP23526 432 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 TGFBR1P36897 503 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 ATP1A4Q13733 1029 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 OR7A5Q15622 319 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 TRAM1Q15629 374 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 ZNF829Q3KNS6 432 aaPredicted RBP16.05■□□□□ 0.16
RAB39A-201ENST00000320578 ZNF404Q494X3 552 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 CDONQ4KMG0 1287 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 SOWAHCQ53LP3 525 aaPredicted RBP16.05■□□□□ 0.16
RAB39A-201ENST00000320578 SLC16A9Q7RTY1 509 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 PXKQ7Z7A4 578 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 DTX1Q86Y01 620 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 KLBQ86Z14 1044 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 ZNRF4Q8WWF5 429 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 S100ZQ8WXG8 99 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 MED18Q9BUE0 208 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 ISG20L2Q9H9L3 353 aaKnown RBP16.05■□□□□ 0.16
RAB39A-201ENST00000320578 A0A0C4DFX4 3053 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 C11orf98E9PRG8 122 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 CD1AP06126 327 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 DPP4P27487 766 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 SOX6P35712 828 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 ACVR1BP36896 505 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 DAP3P51398 398 aaKnown RBP16.05■□□□□ 0.16
RAB39A-201ENST00000320578 MYBPHQ13203 477 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 ZNF468Q5VIY5 522 aaPredicted RBP16.05■□□□□ 0.16
RAB39A-201ENST00000320578 VASH1Q7L8A9 365 aaPredicted RBP16.05■□□□□ 0.16
RAB39A-201ENST00000320578 CROCCP3Q8IVE0 287 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 OR6Q1Q8NGQ2 317 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 HAVCR2Q8TDQ0 301 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 DTNBP1Q96EV8 351 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 EXOSC4Q9NPD3 245 aaKnown RBP16.05■□□□□ 0.16
RAB39A-201ENST00000320578 TXNL4BQ9NX01 149 aaKnown RBP16.05■□□□□ 0.16
RAB39A-201ENST00000320578 GSTK1Q9Y2Q3 226 aa16.05■□□□□ 0.16
RAB39A-201ENST00000320578 MRPS18CQ9Y3D5 142 aaKnown RBP16.05■□□□□ 0.16
RAB39A-201ENST00000320578 SPEGQ15772 3267 aa16.04■□□□□ 0.16
RAB39A-201ENST00000320578 LOC102725191A0A1B0GVB3 256 aa16.04■□□□□ 0.16
RAB39A-201ENST00000320578 SPAARA0A1B0GVQ0 90 aa16.04■□□□□ 0.16
RAB39A-201ENST00000320578 ARHGEF9O43307 516 aa16.04■□□□□ 0.16
RAB39A-201ENST00000320578 PLPP2O43688 288 aa16.04■□□□□ 0.16
RAB39A-201ENST00000320578 CELP19835 753 aa16.04■□□□□ 0.16
RAB39A-201ENST00000320578 IL11P20809 199 aa16.04■□□□□ 0.16
RAB39A-201ENST00000320578 RBMS1P29558 406 aaKnown RBP16.04■□□□□ 0.16
RAB39A-201ENST00000320578 CYB561P49447 251 aa16.04■□□□□ 0.16
RAB39A-201ENST00000320578 RPS25P62851 125 aaKnown RBP16.04■□□□□ 0.16
RAB39A-201ENST00000320578 GABREP78334 506 aa16.04■□□□□ 0.16
RAB39A-201ENST00000320578 TLE3Q04726 772 aa16.04■□□□□ 0.16
RAB39A-201ENST00000320578 AIMP2Q13155 320 aaKnown RBP16.04■□□□□ 0.16
RAB39A-201ENST00000320578 DCAF10Q5QP82 559 aa16.04■□□□□ 0.16
RAB39A-201ENST00000320578 KCTD20Q7Z5Y7 419 aa16.04■□□□□ 0.16
RAB39A-201ENST00000320578 OR6V1Q8N148 313 aa16.04■□□□□ 0.16
RAB39A-201ENST00000320578 OR51L1Q8NGJ5 315 aa16.04■□□□□ 0.16
RAB39A-201ENST00000320578 THOC3Q96J01 351 aaKnown RBP16.04■□□□□ 0.16
RAB39A-201ENST00000320578 FER1L6-AS2Q96M78 137 aa16.04■□□□□ 0.16
RAB39A-201ENST00000320578 TBX5Q99593 518 aa16.04■□□□□ 0.16
RAB39A-201ENST00000320578 ZMIZ1Q9ULJ6 1067 aa16.04■□□□□ 0.16
RAB39A-201ENST00000320578 KNTC1P50748 2209 aa16.04■□□□□ 0.16
RAB39A-201ENST00000320578 MASP2O00187 686 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 ZIC3O60481 467 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 IL1AP01583 271 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 ENTPD1P49961 510 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 BMXP51813 675 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 B3GNTL1Q67FW5 361 aaPredicted RBP16.03■□□□□ 0.16
RAB39A-201ENST00000320578 NHLRC1Q6VVB1 395 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 TIGD4Q8IY51 512 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 OR6K6Q8NGW6 343 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 MCFD2Q8NI22 146 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 THAP4Q8WY91 577 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 TRMT61AQ96FX7 289 aaKnown RBP16.03■□□□□ 0.16
RAB39A-201ENST00000320578 C4orf36Q96KX1 117 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 KCTD7Q96MP8 289 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 CDADC1Q9BWV3 514 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 RNF167Q9H6Y7 350 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 POLHQ9Y253 713 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 RPH3AQ9Y2J0 694 aaPredicted RBP16.03■□□□□ 0.16
RAB39A-201ENST00000320578 PCSK5Q92824 1860 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 A0A075B6Q4 140 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 SHISA8B8ZZ34 492 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 H3BML4 177 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 SRD5A2P31213 254 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 PYCR1P32322 319 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms