RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 RNF4P78317 190 aa12.59□□□□□ -0.39
NPC1-201ENST00000269228 EIF5AL1Q6IS14 154 aaKnown RBP12.59□□□□□ -0.39
NPC1-201ENST00000269228 OR1L3Q8NH93 324 aa12.59□□□□□ -0.39
NPC1-201ENST00000269228 KLF13Q9Y2Y9 288 aaPredicted RBP12.59□□□□□ -0.39
NPC1-201ENST00000269228 SPAG17Q6Q759 2223 aa12.59□□□□□ -0.39
NPC1-201ENST00000269228 ABHD16AO95870 558 aa12.59□□□□□ -0.39
NPC1-201ENST00000269228 MT-CO3P00414 261 aa12.59□□□□□ -0.39
NPC1-201ENST00000269228 MTFR2Q6P444 385 aa12.59□□□□□ -0.39
NPC1-201ENST00000269228 GDPD1Q8N9F7 314 aa12.59□□□□□ -0.39
NPC1-201ENST00000269228 LAT2Q9GZY6 243 aa12.59□□□□□ -0.39
NPC1-201ENST00000269228 NGBQ9NPG2 151 aa12.59□□□□□ -0.39
NPC1-201ENST00000269228 ABRACLQ9P1F3 81 aa12.59□□□□□ -0.39
NPC1-201ENST00000269228 FXYD1O00168 92 aa12.58□□□□□ -0.39
NPC1-201ENST00000269228 HTR1FP30939 366 aa12.58□□□□□ -0.39
NPC1-201ENST00000269228 MESP2Q0VG99 397 aa12.58□□□□□ -0.39
NPC1-201ENST00000269228 MEP1BQ16820 701 aa12.58□□□□□ -0.39
NPC1-201ENST00000269228 ZNF454Q8N9F8 522 aa12.58□□□□□ -0.39
NPC1-201ENST00000269228 TBC1D15Q8TC07 691 aa12.58□□□□□ -0.39
NPC1-201ENST00000269228 RPL3LQ92901 407 aaKnown RBP12.58□□□□□ -0.39
NPC1-201ENST00000269228 GPR160Q9UJ42 338 aa12.58□□□□□ -0.39
NPC1-201ENST00000269228 PPP1CAP62136 330 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 ZNF793Q6ZN11 406 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 ELMOD2Q8IZ81 293 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 GHSRQ92847 366 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 SGCZQ96LD1 299 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 ZNF638Q14966 1978 aaKnown RBP12.58□□□□□ -0.4
NPC1-201ENST00000269228 ZNF814B7Z6K7 855 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 SLC16A6O15403 523 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 GABREP78334 506 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 LSAMPQ13449 338 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 PTOV1Q86YD1 416 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 APH1AQ96BI3 265 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 HINT2Q9BX68 163 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 BCL2L10Q9HD36 194 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 CLEC1BQ9P126 229 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 EPOPA6NHQ4 379 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 TOXO94900 526 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 HOXB3P14651 431 aaPredicted RBP12.58□□□□□ -0.4
NPC1-201ENST00000269228 RAC2P15153 192 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 PNLIPRP2P54317 469 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 RPL27P61353 136 aaKnown RBP12.58□□□□□ -0.4
NPC1-201ENST00000269228 FOXRED1Q96CU9 486 aaPredicted RBP12.58□□□□□ -0.4
NPC1-201ENST00000269228 MRI1Q9BV20 369 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 MGAT4CQ9UBM8 478 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 COA3Q9Y2R0 106 aaPredicted RBP12.58□□□□□ -0.4
NPC1-201ENST00000269228 SEC16AO15027 2179 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 AKR1C2P52895 323 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 CAV3P56539 151 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 PRSS41Q7RTY9 318 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 RHOXF1Q8NHV9 184 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 GRPEL2Q8TAA5 225 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 MICU1Q9BPX6 476 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 C12orf4Q9NQ89 552 aa12.58□□□□□ -0.4
NPC1-201ENST00000269228 TRIM64A6NGJ6 449 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 KNG1P01042 644 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 GNMTQ14749 295 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 COX15Q7KZN9 410 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 ABI3BPQ7Z7G0 1075 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 AMER3Q8N944 861 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 HSD17B8Q92506 261 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 WWTR1Q9GZV5 400 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 ASB4Q9Y574 426 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 TRAPPC2LH3BP13 241 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 CREBL2O60519 120 aaPredicted RBP12.57□□□□□ -0.4
NPC1-201ENST00000269228 HPGDSO60760 199 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 RAB3DO95716 219 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 ITGB2P05107 769 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 IGFBP1P08833 259 aaPredicted RBP12.57□□□□□ -0.4
NPC1-201ENST00000269228 RPS25P62851 125 aaKnown RBP12.57□□□□□ -0.4
NPC1-201ENST00000269228 MNTQ99583 582 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 NRTNQ99748 197 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 NUDT9Q9BW91 350 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 PCDHB10Q9UN67 800 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 TMEM212A6NML5 194 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 STMND1H3BQB6 276 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 SELENOFO60613 162 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 CHRNB1P11230 501 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 SEC61A1P61619 476 aaKnown RBP12.57□□□□□ -0.4
NPC1-201ENST00000269228 PPIAP62937 165 aaKnown RBP12.57□□□□□ -0.4
NPC1-201ENST00000269228 MZT1Q08AG7 82 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 SLC10A1Q14973 349 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 ANKRD13BQ86YJ7 626 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 UCN3Q969E3 161 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 TMEM106AQ96A25 262 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 OR2A5Q96R48 311 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 NAA50Q9GZZ1 169 aaKnown RBP12.57□□□□□ -0.4
NPC1-201ENST00000269228 APMAPQ9HDC9 416 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 CHST11Q9NPF2 352 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 CROCCQ5TZA2 2017 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 PRAMEF27A3QJZ7 478 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 NCR1O76036 304 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 IFNA7P01567 189 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 EMDP50402 254 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 TRA2AQ13595 282 aaKnown RBP eCLIP12.57□□□□□ -0.4
NPC1-201ENST00000269228 PRTGQ2VWP7 1150 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 OR14J1Q9UGF5 321 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 MBD1Q9UIS9 605 aaPredicted RBP12.57□□□□□ -0.4
NPC1-201ENST00000269228 DIMT1Q9UNQ2 313 aaKnown RBP12.57□□□□□ -0.4
NPC1-201ENST00000269228 CEPT1Q9Y6K0 416 aa12.57□□□□□ -0.4
NPC1-201ENST00000269228 FRG2CA6NGY1 282 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms