RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ZNF74Q16587 644 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 DMRTC1Q5HYR2 192 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 KCNRGQ8N5I3 272 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 OR5M1Q8NGP8 315 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 PSD2Q9BQI7 771 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 TMEM59Q9BXS4 323 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 GLIPR2Q9H4G4 154 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 ACOXLQ9NUZ1 547 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 SLC35A3Q9Y2D2 325 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 CCDC88AQ3V6T2 1871 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 COL2A1P02458 1487 aaPredicted RBP11.16□□□□□ -0.62
SMG6-201ENST00000263073 ACSM1Q08AH1 577 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 TMEM182Q6ZP80 229 aaPredicted RBP11.16□□□□□ -0.62
SMG6-201ENST00000263073 TMEM179BQ7Z7N9 219 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 NKAIN4Q8IVV8 208 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 PLPP5Q8NEB5 264 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 MARC2Q969Z3 335 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 C1orf123Q9NWV4 160 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 ASB1Q9Y576 335 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 TMEM202A6NGA9 273 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 HNRNPA2B1P22626 353 aaKnown RBP11.16□□□□□ -0.62
SMG6-201ENST00000263073 SOX18P35713 384 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 ELLP55199 621 aaPredicted RBP11.16□□□□□ -0.62
SMG6-201ENST00000263073 CLDN17P56750 224 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 CTBSQ01459 385 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 NXNL2Q5VZ03 156 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 NIPAL3Q6P499 406 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 TMEM99Q8N816 258 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 DMBX1Q8NFW5 382 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 OR52I2Q8NH67 350 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 YIPF5Q969M3 257 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 SFXN1Q9H9B4 322 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 PCDHGA5Q9Y5G8 931 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 CROCCQ5TZA2 2017 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 A0A087WV62 115 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 SLC16A6O15403 523 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 HTR1FP30939 366 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 ARG2P78540 354 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 IKZF1Q13422 519 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 C4orf17Q53FE4 359 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 RNLSQ5VYX0 342 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 DLEU7Q6UYE1 221 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 BAGE3Q86Y29 109 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 BAGE2Q86Y30 109 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 SLC25A46Q96AG3 418 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 TM4SF18Q96CE8 201 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 OBP2BQ9NPH6 170 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 SPATA6Q9NWH7 488 aaPredicted RBP11.16□□□□□ -0.62
SMG6-201ENST00000263073 H7C1Q1 480 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 KCNK2O95069 426 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 PAPLNO95428 1278 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 GDF1P27539 372 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 IAH1Q2TAA2 248 aaPredicted RBP11.15□□□□□ -0.62
SMG6-201ENST00000263073 TOR2AQ5JU69 321 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 SOHLH1Q5JUK2 328 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 OR52A5Q9H2C5 316 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 A0A087WZY1 265 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 H0YGG7 62 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 B3GALNT1O75752 331 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 APOA2P02652 100 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 ITGB7P26010 798 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 MFGE8Q08431 387 aaPredicted RBP11.15□□□□□ -0.62
SMG6-201ENST00000263073 KIAA0141Q14154 515 aaPredicted RBP11.15□□□□□ -0.62
SMG6-201ENST00000263073 PKDCCQ504Y2 493 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 VHLLQ6RSH7 139 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 STEAP1Q9UHE8 339 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 LRIT2A6NDA9 550 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 PRKNO60260 465 aaPredicted RBP11.15□□□□□ -0.62
SMG6-201ENST00000263073 CLDN1O95832 211 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 CNR1P21554 472 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 ARNTP27540 789 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 HTR5AP47898 357 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 TNFRSF17Q02223 184 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 MEP1BQ16820 701 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 CLVS2Q5SYC1 327 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 NKAIN2Q5VXU1 208 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 B3GNT9Q6UX72 402 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 LRRC56Q8IYG6 542 aaPredicted RBP11.15□□□□□ -0.62
SMG6-201ENST00000263073 OR5L1Q8NGL2 311 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 SCARB1Q8WTV0 552 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 FAM3DQ96BQ1 224 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 SLC6A17Q9H1V8 727 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 R3HDMLQ9H3Y0 253 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 ARNT2Q9HBZ2 717 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 CCL26Q9Y258 94 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 TRAPPC2LH3BP13 241 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 LGI1O95970 557 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 RABIFP47224 123 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 DSC1Q08554 894 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 PMPCAQ10713 525 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 Q499Y3 187 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 PDLIM3Q53GG5 364 aaPredicted RBP11.15□□□□□ -0.62
SMG6-201ENST00000263073 PTRH1Q86Y79 214 aaKnown RBP11.15□□□□□ -0.62
SMG6-201ENST00000263073 ZNF808Q8N4W9 903 aaPredicted RBP11.15□□□□□ -0.62
SMG6-201ENST00000263073 NANOGP1Q8N7R0 232 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 KIAA1143Q96AT1 154 aaPredicted RBP11.15□□□□□ -0.62
SMG6-201ENST00000263073 FAM103A1Q9BTL3 118 aaKnown RBP11.15□□□□□ -0.62
SMG6-201ENST00000263073 SLC2A11Q9BYW1 496 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 TAF9BQ9HBM6 251 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 ZNF286AQ9HBT8 521 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms