RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 RRHO14718 337 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 HCN1O60741 890 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 CTSVO60911 334 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 GLRA3O75311 464 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 JRKO75564 520 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 STK16O75716 305 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 NKX2-2O95096 273 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 SYF2O95926 243 aaKnown RBP3.28□□□□□ -1.88
RBM39-201ENST00000253363 KRT16P08779 473 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 RD3LP0DJH9 198 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 SMIM10L1P0DMW3 83 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 CDH1P12830 882 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 CPA3P15088 417 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 PVRP15151 417 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 ZNF26P17031 533 aaPredicted RBP3.28□□□□□ -1.88
RBM39-201ENST00000253363 ITGA2P17301 1181 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 CCNOP22674 350 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 F8A1P23610 371 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 ARG2P78540 354 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 DGCR2P98153 550 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 MAT1AQ00266 395 aaKnown RBP3.28□□□□□ -1.88
RBM39-201ENST00000253363 ROR2Q01974 943 aaKnown RBP3.28□□□□□ -1.88
RBM39-201ENST00000253363 NAE1Q13564 534 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 LY6DQ14210 128 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 USF2Q15853 346 aaPredicted RBP3.28□□□□□ -1.88
RBM39-201ENST00000253363 VWC2Q2TAL6 325 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 ANKRD55Q3KP44 614 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 LSM12Q3MHD2 195 aaKnown RBP3.28□□□□□ -1.88
RBM39-201ENST00000253363 TIGD2Q4W5G0 525 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 SERTAD4-AS1Q5TG53 156 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 TTC23Q5W5X9 447 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 OR5M10Q6IEU7 315 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 OR52E8Q6IFG1 317 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 FAM122CQ6P4D5 195 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 OPN5Q6U736 354 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 DLEU7Q6UYE1 221 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 Q6ZPB1 254 aaPredicted RBP3.28□□□□□ -1.88
RBM39-201ENST00000253363 DCDC5Q6ZRR9 648 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 ANKRD37Q7Z713 158 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 IFT20Q8IY31 132 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 ZBED8Q8IZ13 594 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 LIX1Q8N485 282 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 AMER3Q8N944 861 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 NUBPLQ8TB37 319 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 GLYATL2Q8WU03 294 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 ASB5Q8WWX0 329 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 LZICQ8WZA0 190 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 SNRNP40Q96DI7 357 aaKnown RBP3.28□□□□□ -1.88
RBM39-201ENST00000253363 SMIM10Q96HG1 83 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 LURAP1Q96LR2 239 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 IMMP1LQ96LU5 166 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 ZNF778Q96MU6 729 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 C7orf50Q9BRJ6 194 aaKnown RBP3.28□□□□□ -1.88
RBM39-201ENST00000253363 UTP23Q9BRU9 249 aaKnown RBP3.28□□□□□ -1.88
RBM39-201ENST00000253363 CADM1Q9BY67 442 aaKnown RBP3.28□□□□□ -1.88
RBM39-201ENST00000253363 FAM60AQ9NP50 221 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 SLC6A13Q9NSD5 602 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 SLC17A7Q9P2U7 560 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 OPTCQ9UBM4 332 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 COPS7AQ9UBW8 275 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 CLEC2DQ9UHP7 191 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 NAGKQ9UJ70 344 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 TINAGQ9UJW2 476 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 UTS2RQ9UKP6 389 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 FAF1Q9UNN5 650 aaPredicted RBP3.28□□□□□ -1.88
RBM39-201ENST00000253363 CMAHPQ9Y471 501 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 LOC100509620A0A075B734 347 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 A0A0J9YVX5 310 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 C13orf42A0A1B0GVH6 325 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 A0A1W2PRB8 838 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 A8MUI8 341 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 KLRC4-KLRK1H3BQV0 150 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 MGST3O14880 152 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 ARPC3O15145 178 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 NDUFS4O43181 175 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 FCMRO60667 390 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 STX11O75558 287 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 OR4F21O95013 312 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 KRT6AP02538 564 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 CD1DP15813 335 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 UQCRC2P22695 453 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 TACR3P29371 465 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 IL12BP29460 328 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 TIA1P31483 386 aaKnown RBP eCLIP3.28□□□□□ -1.882e-7■■■■□ 26.7
RBM39-201ENST00000253363 DCTDP32321 178 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 RPL3P39023 403 aaKnown RBP3.28□□□□□ -1.88
RBM39-201ENST00000253363 NAA10P41227 235 aaPredicted RBP3.28□□□□□ -1.88
RBM39-201ENST00000253363 RPL21P46778 160 aaKnown RBP3.28□□□□□ -1.88
RBM39-201ENST00000253363 HLCSP50747 726 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 PKNOX1P55347 436 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 OR4D2P58180 307 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 SEC61GP60059 68 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 RPL23AP62750 156 aaKnown RBP3.28□□□□□ -1.88
RBM39-201ENST00000253363 KLC1Q07866 573 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 SPOCK1Q08629 439 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 FGL1Q08830 312 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 SCRN3Q0VDG4 424 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 HEPACAMQ14CZ8 416 aa3.28□□□□□ -1.88
RBM39-201ENST00000253363 TRIP13Q15645 432 aaPredicted RBP3.28□□□□□ -1.88
RBM39-201ENST00000253363 INPP5JQ15735 1006 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms