RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 SERPINA3P01011 423 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 IGF2P01344 180 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 IGLV3-19P01714 112 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 YES1P07947 543 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 GKN3PP0CG01 181 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 SAGP10523 405 aaPredicted RBP7.16□□□□□ -1.26
CXCR4-201ENST00000241393 TALDO1P37837 337 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 NR4A2P43354 598 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 ZNF134P52741 427 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 IGLV3-21P80748 117 aaPredicted RBP7.16□□□□□ -1.26
CXCR4-201ENST00000241393 MC2RQ01718 297 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 ID2Q02363 134 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 GGTLC2Q14390 218 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 RAB30Q15771 203 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 ISXQ2M1V0 245 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 TBRG1Q3YBR2 411 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 ZNF362Q5T0B9 420 aaPredicted RBP7.16□□□□□ -1.26
CXCR4-201ENST00000241393 Q6ZSR6 202 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 TRILQ7L0X0 811 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 PXKQ7Z7A4 578 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 TCTE3Q8IZS6 198 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 SYS1Q8N2H4 156 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 TMEM99Q8N816 258 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 POMGNT2Q8NAT1 580 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 AVL9Q8NBF6 648 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 OR13C2Q8NGS9 318 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 OR5W2Q8NH69 310 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 PFN4Q8NHR9 129 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 PHYHIPQ92561 330 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 MRPL48Q96GC5 212 aaKnown RBP7.16□□□□□ -1.26
CXCR4-201ENST00000241393 CCDC3Q9BQI4 270 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 TPSD1Q9BZJ3 242 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 TP63Q9H3D4 680 aaPredicted RBP7.16□□□□□ -1.26
CXCR4-201ENST00000241393 ZNF768Q9H5H4 540 aaKnown RBP7.16□□□□□ -1.26
CXCR4-201ENST00000241393 FOLH1BQ9HBA9 442 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 MEPEQ9NQ76 525 aaPredicted RBP7.16□□□□□ -1.26
CXCR4-201ENST00000241393 DDX28Q9NUL7 540 aaKnown RBP7.16□□□□□ -1.26
CXCR4-201ENST00000241393 RABL2AQ9UBK7 228 aaPredicted RBP7.16□□□□□ -1.26
CXCR4-201ENST00000241393 IL20RAQ9UHF4 553 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 POMT2Q9UKY4 750 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 RABL2BQ9UNT1 228 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 MRPS33Q9Y291 106 aaKnown RBP7.16□□□□□ -1.26
CXCR4-201ENST00000241393 CA5BQ9Y2D0 317 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 F5P12259 2224 aa7.15□□□□□ -1.26
CXCR4-201ENST00000241393 LRP4O75096 1905 aa7.15□□□□□ -1.26
CXCR4-201ENST00000241393 TRAV1-2A0A0B4J238 106 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 A0A1B0GTQ1 180 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 GXYLT2A0PJZ3 443 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 EPOPA6NHQ4 379 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 CD8B2A6NJW9 211 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 CENPBD1B2RD01 187 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 NPIPB9F8W1W9 429 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 LRRTM2O43300 516 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 LYRM1O43325 122 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 ORC5O43913 435 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 OR10H2O60403 315 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 SRPX2O60687 465 aaPredicted RBP7.15□□□□□ -1.27
CXCR4-201ENST00000241393 SEMA4FO95754 770 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 CT62P0C5K7 136 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 NPR2P20594 1047 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 S1PR1P21453 382 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 RBMS1P29558 406 aaKnown RBP7.15□□□□□ -1.27
CXCR4-201ENST00000241393 ACAA2P42765 397 aaKnown RBP7.15□□□□□ -1.27
CXCR4-201ENST00000241393 RFX3P48380 749 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 GPR143P51810 404 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 CAV3P56539 151 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 CLDN20P56880 219 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 RAB25P57735 213 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 BTG1P62324 171 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 ACTA2P62736 377 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 ACTG2P63267 376 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 IL18Q14116 193 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 EXOSC7Q15024 291 aaKnown RBP7.15□□□□□ -1.27
CXCR4-201ENST00000241393 SHHQ15465 462 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 PRTGQ2VWP7 1150 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 KLHL12Q53G59 568 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 DMKNQ6E0U4 476 aaPredicted RBP7.15□□□□□ -1.27
CXCR4-201ENST00000241393 ULK3Q6PHR2 472 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 PRSS41Q7RTY9 318 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 OAFQ86UD1 273 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 ZNF595Q8IYB9 648 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 ZNF440Q8IYI8 595 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 SLC44A3Q8N4M1 653 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 OR10H4Q8NGA5 316 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 OR52R1Q8NGF1 315 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 OR5T3Q8NGG3 340 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 SLC37A2Q8TED4 501 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 CAPSLQ8WWF8 208 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 CNOT9Q92600 299 aaKnown RBP7.15□□□□□ -1.27
CXCR4-201ENST00000241393 SENP5Q96HI0 755 aaPredicted RBP7.15□□□□□ -1.27
CXCR4-201ENST00000241393 NECTIN4Q96NY8 510 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 GDF15Q99988 308 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 MARVELD1Q9BSK0 173 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 SLC19A3Q9BZV2 496 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 MMP28Q9H239 520 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 ISG20L2Q9H9L3 353 aaKnown RBP7.15□□□□□ -1.27
CXCR4-201ENST00000241393 UNKLQ9H9P5 680 aaKnown RBP7.15□□□□□ -1.27
CXCR4-201ENST00000241393 ADGRL4Q9HBW9 690 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 MMP17Q9ULZ9 603 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 ICAM5Q9UMF0 924 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms