RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Zmat3O54836 290 aaKnown RBP14.95□□□□□ -0.02
Trim28-201ENSMUST00000005705 Papss2O88428 621 aa14.95□□□□□ -0.02
Trim28-201ENSMUST00000005705 ChrndP02716 520 aa14.95□□□□□ -0.02
Trim28-201ENSMUST00000005705 NelfeP19426 375 aa14.95□□□□□ -0.02
Trim28-201ENSMUST00000005705 VipP32648 170 aa14.95□□□□□ -0.02
Trim28-201ENSMUST00000005705 AcadlP51174 430 aaKnown RBP14.95□□□□□ -0.02
Trim28-201ENSMUST00000005705 Dlk1Q09163 385 aa14.95□□□□□ -0.02
Trim28-201ENSMUST00000005705 Tmprss11bQ14C59 416 aa14.95□□□□□ -0.02
Trim28-201ENSMUST00000005705 Trp53i11Q4QQM4 189 aa14.95□□□□□ -0.02
Trim28-201ENSMUST00000005705 4930512M02RikQ5SQK8 218 aa14.95□□□□□ -0.02
Trim28-201ENSMUST00000005705 Trappc6aQ78XR0 159 aa14.95□□□□□ -0.02
Trim28-201ENSMUST00000005705 Carnmt1Q80UY1 400 aa14.95□□□□□ -0.02
Trim28-201ENSMUST00000005705 Plekhm3Q8BM47 761 aa14.95□□□□□ -0.02
Trim28-201ENSMUST00000005705 Smim3Q99PE5 60 aa14.95□□□□□ -0.02
Trim28-201ENSMUST00000005705 Hcfc1r1Q9CYQ5 120 aa14.95□□□□□ -0.02
Trim28-201ENSMUST00000005705 Spns3Q9D232 514 aa14.95□□□□□ -0.02
Trim28-201ENSMUST00000005705 Thsd1Q9JM61 851 aa14.95□□□□□ -0.02
Trim28-201ENSMUST00000005705 Olfr576A0A0G2JFH3 312 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Gm13420A0A140LJJ2 248 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Igkv15-103A0A140T8P3 115 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Cldn20G5E8X0 219 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Slc30a4O35149 430 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 H2-EaP01904 255 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 P04224 255 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Oprd1P32300 372 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 HlxQ61670 476 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Gpr75Q6X632 540 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Crls1Q80ZM8 303 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 SinhcafQ8C8M1 221 aaKnown RBP14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Dusp15Q8R4V2 235 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Olfr820Q8VFU5 312 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Olfr651Q8VG78 313 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Nkx2-4Q9EQM3 354 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Fgf21Q9JJN1 210 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Sectm1bQ9JL59 212 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Fam83cA2ARK0 776 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 LexmA2AVQ5 414 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Scml2B1AVB3 969 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Zfp1P08042 402 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 DbiP31786 87 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Slc11a1P41251 548 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 P2rx1P51576 399 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Btg1P62325 171 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Art1Q60935 325 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Cd53Q61451 219 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 NovQ64299 354 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Olfr645Q7TRQ1 315 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Olfr734Q8VFT4 313 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 NcmapQ99JS0 100 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Mpc2Q9D023 127 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Cdh20Q9Z0M3 801 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Ssc4dA1L0T3 586 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Gm9493F6SVV1 192 aaKnown RBP14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 MagP20917 626 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Slc9a3r1P70441 355 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 NfkbidQ2TB02 327 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Ptp4a1Q63739 173 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Zfand1Q8BFR6 268 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Pramef8Q8CE24 480 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Slc16a14Q8K1C7 512 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 Klf11Q8K1S5 502 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 GpnmbQ99P91 574 aa14.94□□□□□ -0.02
Trim28-201ENSMUST00000005705 4930402F06RikA2AUQ8 332 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Olfr110A2RT31 317 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Tmem229aB9EJI9 371 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Il13P20109 131 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Tead3P70210 439 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Tcf7Q00417 419 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Slc6a5Q761V0 799 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Olfr111Q7TRK1 317 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Mab21l2Q8BPP1 359 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Papd4Q91YI6 484 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Ppa1Q9D819 289 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Cldnd2Q9D9H2 167 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Gm8251F6VUT6 1994 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Igkv4-86A0A0G2JGE7 114 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 9630041A04RikD3Z3U4 205 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Gm5799E9Q2M1 201 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Olfr420E9Q4G0 321 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Gm20683H3BKJ1 410 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Sstr5O08858 362 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 CtssO70370 340 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 AdaP03958 352 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Zfp13P10754 512 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 IapP24822 559 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Gsx2P31316 305 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 TfptQ3U1J1 259 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Mccc2Q3ULD5 563 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Tgfbr2Q62312 592 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 D11Wsu47eQ6PIX9 558 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Olfr487Q7TRU9 314 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Arfrp1Q8BXL7 201 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 H1fntQ8CJI4 398 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 SgtbQ8VD33 304 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Cmpk1Q9DBP5 196 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Slc15a1Q9JIP7 709 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Grb14Q9JLM9 538 aa14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Ndrg2Q9QYG0 371 aaKnown RBP14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 TprF6ZDS4 2431 aaKnown RBP14.93□□□□□ -0.02
Trim28-201ENSMUST00000005705 Olfr1025-ps1A0A140T8K3 312 aa14.92□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms