RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 SMARCD3Q6STE5 483 aa10.37□□□□□ -0.75
CTCFL-221ENST00000608903 CENPSQ8N2Z9 138 aa10.37□□□□□ -0.75
CTCFL-221ENST00000608903 KDM8Q8N371 416 aa10.37□□□□□ -0.75
CTCFL-221ENST00000608903 FAM109AQ8N4B1 249 aa10.37□□□□□ -0.75
CTCFL-221ENST00000608903 EXD3Q8N9H8 876 aa10.37□□□□□ -0.75
CTCFL-221ENST00000608903 ZNF540Q8NDQ6 660 aa10.37□□□□□ -0.75
CTCFL-221ENST00000608903 OR6S1Q8NH40 331 aa10.37□□□□□ -0.75
CTCFL-221ENST00000608903 RHOXF1Q8NHV9 184 aa10.37□□□□□ -0.75
CTCFL-221ENST00000608903 ZNF417Q8TAU3 575 aa10.37□□□□□ -0.75
CTCFL-221ENST00000608903 TRUB1Q8WWH5 349 aaKnown RBP10.37□□□□□ -0.75
CTCFL-221ENST00000608903 ADGRG7Q96K78 797 aa10.37□□□□□ -0.75
CTCFL-221ENST00000608903 ZNF587Q96SQ5 575 aaPredicted RBP10.37□□□□□ -0.75
CTCFL-221ENST00000608903 SLC25A19Q9HC21 320 aa10.37□□□□□ -0.75
CTCFL-221ENST00000608903 AMBNQ9NP70 447 aa10.37□□□□□ -0.75
CTCFL-221ENST00000608903 ACKR4Q9NPB9 350 aa10.37□□□□□ -0.75
CTCFL-221ENST00000608903 SPRR3Q9UBC9 169 aa10.37□□□□□ -0.75
CTCFL-221ENST00000608903 B4GALT7Q9UBV7 327 aa10.37□□□□□ -0.75
CTCFL-221ENST00000608903 HIF3AQ9Y2N7 669 aa10.37□□□□□ -0.75
CTCFL-221ENST00000608903 TPRKBQ9Y3C4 175 aa10.37□□□□□ -0.75
CTCFL-221ENST00000608903 PCDHGB1Q9Y5G3 927 aa10.37□□□□□ -0.75
CTCFL-221ENST00000608903 BSNQ9UPA5 3926 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 PLPP3O14495 311 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 TNFSF11O14788 317 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 HCN1O60741 890 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 FAM20BO75063 409 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 AKR7A3O95154 331 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 PPP1R3DO95685 299 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 OCM2P0CE71 109 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 OCMP0CE72 109 aaPredicted RBP10.36□□□□□ -0.75
CTCFL-221ENST00000608903 ZNF182P17025 639 aaPredicted RBP10.36□□□□□ -0.75
CTCFL-221ENST00000608903 BMP7P18075 431 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 ACVR2AP27037 513 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 SLC9A3P48764 834 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 DIO1P49895 249 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 LHX2P50458 406 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 MAP2K6P52564 334 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 MVKQ03426 396 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 SLC10A1Q14973 349 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 NHLRC1Q6VVB1 395 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 TMPPEQ6ZT21 453 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 ASB18Q6ZVZ8 466 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 BCDIN3DQ7Z5W3 292 aaKnown RBP10.36□□□□□ -0.75
CTCFL-221ENST00000608903 SLC22A16Q86VW1 577 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 SIAH3Q8IW03 269 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 TMEM99Q8N816 258 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 RAB2BQ8WUD1 216 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 TM9SF4Q92544 642 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 SRXN1Q9BYN0 137 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 ADAM18Q9Y3Q7 739 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 PCDHGB7Q9Y5F8 929 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 SNX5Q9Y5X3 404 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 ZZEF1O43149 2961 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 ATMQ13315 3056 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 SPENQ96T58 3664 aaKnown RBP10.36□□□□□ -0.75
CTCFL-221ENST00000608903 HTR3EA5X5Y0 456 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 IMPA2O14732 288 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 PRKYO43930 277 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 RCBTB2O95199 551 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 MT-ATP6P00846 226 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 F13BP05160 661 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 HLA-DOBP13765 273 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 NR4A1P22736 598 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 BCAP31P51572 246 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 PSMD7P51665 324 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 NUDT6P53370 316 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 CLDN18P56856 261 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 OR2B6P58173 313 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 PGGHGQ32M88 737 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 C5orf46Q6UWT4 87 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 PLXDC2Q6UX71 529 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 SLC16A12Q6ZSM3 486 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 AHSA2Q719I0 299 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 MAMDC2Q7Z304 686 aaPredicted RBP10.36□□□□□ -0.75
CTCFL-221ENST00000608903 Q8NA96 180 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 OR5J2Q8NH18 312 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 TEX47Q8TBZ9 253 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 SLC25A43Q8WUT9 341 aaPredicted RBP10.36□□□□□ -0.75
CTCFL-221ENST00000608903 OSTF1Q92882 214 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 MIB2Q96AX9 1013 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 KLHL15Q96M94 604 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 FUNDC2Q9BWH2 189 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 QPCTLQ9NXS2 382 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 SCN3BQ9NY72 215 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 MRPL39Q9NYK5 338 aaKnown RBP10.36□□□□□ -0.75
CTCFL-221ENST00000608903 TVP23BQ9NYZ1 205 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 ZMIZ1Q9ULJ6 1067 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 CORINQ9Y5Q5 1042 aa10.36□□□□□ -0.75
CTCFL-221ENST00000608903 KIAA1549Q9HCM3 1950 aa10.35□□□□□ -0.75
CTCFL-221ENST00000608903 ZNF99A8MXY4 864 aaPredicted RBP10.35□□□□□ -0.75
CTCFL-221ENST00000608903 OR2T1O43869 369 aa10.35□□□□□ -0.75
CTCFL-221ENST00000608903 NDUFB2O95178 105 aa10.35□□□□□ -0.75
CTCFL-221ENST00000608903 FADS2O95864 444 aaKnown RBP10.35□□□□□ -0.75
CTCFL-221ENST00000608903 CLK1P49759 484 aaKnown RBP10.35□□□□□ -0.75
CTCFL-221ENST00000608903 ERVK-25P63136 954 aa10.35□□□□□ -0.75
CTCFL-221ENST00000608903 C3AR1Q16581 482 aa10.35□□□□□ -0.75
CTCFL-221ENST00000608903 SGCBQ16585 318 aa10.35□□□□□ -0.75
CTCFL-221ENST00000608903 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.35□□□□□ -0.756e-7■□□□□ 10.9
CTCFL-221ENST00000608903 SLC35F1Q5T1Q4 408 aa10.35□□□□□ -0.75
CTCFL-221ENST00000608903 SLC27A4Q6P1M0 643 aa10.35□□□□□ -0.75
CTCFL-221ENST00000608903 C16orf87Q6PH81 154 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms