RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 RGRP47804 291 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 CNN3Q15417 329 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 WDR88Q6ZMY6 472 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 DPPA4Q7L190 304 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 GDF7Q7Z4P5 450 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 IGSF21Q96ID5 467 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 TNFRSF13CQ96RJ3 184 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 ZFYVE21Q9BQ24 234 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 CXXC1Q9P0U4 656 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 TRPM3Q9HCF6 1732 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 C9J4A7 227 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 GABRR1P24046 479 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 MRPL49Q13405 166 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 SERTAD2Q14140 314 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 OR7E24Q6IFN5 339 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 PAQR6Q6TCH4 344 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 SLCO4C1Q6ZQN7 724 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 GLCCI1Q86VQ1 547 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 OR2AK2Q8NG84 335 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 ARHGAP9Q9BRR9 750 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 C20orf24Q9BUV8 137 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 TOLLIPQ9H0E2 274 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 SPACA1Q9HBV2 294 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 GAR1Q9NY12 217 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 PKD1L3Q7Z443 1732 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 C20orf202A1L168 122 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 SQSTM1Q13501 440 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 PGBD5Q8N414 524 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 NKAIN3Q8N8D7 197 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 OR5M8Q8NGP6 311 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 OR13C9Q8NGT0 318 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 FGF20Q9NP95 211 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 STRAPQ9Y3F4 350 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 M0R082 166 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 TSPAN12O95859 305 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 LGI1O95970 557 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 MRPS34P82930 218 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 GLYR1Q49A26 553 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 ABHD12BQ7Z5M8 362 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 BAP18Q8IXM2 172 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 NPRL2Q8WTW4 380 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 RSC1A1Q92681 617 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 BORCS7Q96B45 105 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 CHST8Q9H2A9 424 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 FN3KRPQ9HA64 309 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 ZNF286AQ9HBT8 521 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 PRSS16Q9NQE7 514 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 CSAG2Q9Y5P2 127 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 HLA-HP01893 362 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 FOLR1P15328 257 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 MEOX2P50222 304 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 EXOSC6Q5RKV6 272 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 DPY19L2P2Q6ZN68 376 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 NAXDQ8IW45 347 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 UPRTQ96BW1 309 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 CSF3RQ99062 836 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 CROCCQ5TZA2 2017 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 TNFSF12O43508 249 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 BCL2L11O43521 198 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 SBK3P0C264 359 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 F3P13726 295 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 ZNF28P17035 718 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 SNU13P55769 128 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 RAG2P55895 527 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 DPY19L4Q7Z388 723 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 KIAA1958Q8N8K9 716 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 IL17RCQ8NAC3 791 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 LKAAEAR1Q8TD35 194 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 ST6GAL2Q96JF0 529 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 TMEM59Q9BXS4 323 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 TARM1B6A8C7 271 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 PSMB6P28072 239 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 EFNA3P52797 238 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 FAM71E1Q6IPT2 247 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 HSD11B1LQ7Z5J1 315 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 FAM160A2Q8N612 972 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 METTL27Q8N6F8 245 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 OR14L1PQ8NHC6 308 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 TMED6Q8WW62 240 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 SLC25A19Q9HC21 320 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 SERTAD4Q9NUC0 356 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 IGLON5A6NGN9 336 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 IL5P05113 134 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 ZNF43P17038 809 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 RAB13P51153 203 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 MMP15P51511 669 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 SGCZQ96LD1 299 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 CHST2Q9Y4C5 530 aa13.54□□□□□ -0.24
SMARCA4-214ENST00000589677 KLK8O60259 260 aa13.53□□□□□ -0.24
SMARCA4-214ENST00000589677 B4GALT3O60512 393 aa13.53□□□□□ -0.24
SMARCA4-214ENST00000589677 NSA2O95478 260 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-214ENST00000589677 MBP02144 154 aa13.53□□□□□ -0.24
SMARCA4-214ENST00000589677 SLC6A11P48066 632 aa13.53□□□□□ -0.24
SMARCA4-214ENST00000589677 OR2B8PP59922 312 aa13.53□□□□□ -0.24
SMARCA4-214ENST00000589677 PRSS36Q5K4E3 855 aa13.53□□□□□ -0.24
SMARCA4-214ENST00000589677 CCNJQ5T5M9 372 aa13.53□□□□□ -0.24
SMARCA4-214ENST00000589677 KIAA0907Q7Z7F0 614 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-214ENST00000589677 HSD17B11Q8NBQ5 300 aa13.53□□□□□ -0.24
SMARCA4-214ENST00000589677 OR9K2Q8NGE7 335 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms