RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 MUC13Q9H3R2 512 aa5.26□□□□□ -1.57
VPS25-204ENST00000589577 PIGUQ9H490 435 aa5.26□□□□□ -1.57
VPS25-204ENST00000589577 COQ10BQ9H8M1 238 aa5.26□□□□□ -1.57
VPS25-204ENST00000589577 NANOGQ9H9S0 305 aa5.26□□□□□ -1.57
VPS25-204ENST00000589577 FKRPQ9H9S5 495 aa5.26□□□□□ -1.57
VPS25-204ENST00000589577 CA10Q9NS85 328 aa5.26□□□□□ -1.57
VPS25-204ENST00000589577 SIRT3Q9NTG7 399 aaPredicted RBP5.26□□□□□ -1.57
VPS25-204ENST00000589577 GIN1Q9NXP7 522 aa5.26□□□□□ -1.57
VPS25-204ENST00000589577 TREM2Q9NZC2 230 aa5.26□□□□□ -1.57
VPS25-204ENST00000589577 VAPAQ9P0L0 249 aa5.26□□□□□ -1.57
VPS25-204ENST00000589577 NTMQ9P121 344 aa5.26□□□□□ -1.57
VPS25-204ENST00000589577 ABCG2Q9UNQ0 655 aa5.26□□□□□ -1.57
VPS25-204ENST00000589577 ZNF232Q9UNY5 417 aa5.26□□□□□ -1.57
VPS25-204ENST00000589577 CSMD3Q7Z407 3707 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 ELOVL7A1L3X0 281 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 PRORSD1PA6NEY8 169 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 B9A039 149 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 H0YHG0 523 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 FBP2O00757 339 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 SCDO00767 359 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 STX11O75558 287 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 SERPINB7O75635 380 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 PRKD3O94806 890 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 IGHV3-9P01782 118 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 TFP02787 698 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 BCHEP06276 602 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 ITGA5P08648 1049 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 OR4A8P0C604 315 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 PABPC4LP0CB38 370 aaKnown RBP5.25□□□□□ -1.57
VPS25-204ENST00000589577 OR12D1P0DN82 309 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 HOXB6P17509 224 aaKnown RBP5.25□□□□□ -1.57
VPS25-204ENST00000589577 GPX2P18283 190 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 ME2P23368 584 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 LCN1P31025 176 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 IFNA8P32881 189 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 SFTPDP35247 375 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 CDKN2CP42773 168 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 CARD18P57730 90 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 PSG6Q00889 435 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 COL10A1Q03692 680 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 LIPEQ05469 1076 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 RASGEF1BQ0VAM2 473 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 SCARB2Q14108 478 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 LARS2Q15031 903 aaKnown RBP5.25□□□□□ -1.57
VPS25-204ENST00000589577 SLC9A3R2Q15599 337 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 GABRA6Q16445 453 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 PLPPR5Q32ZL2 321 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 RUNDC3AQ59EK9 446 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 ELFN2Q5R3F8 820 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.25□□□□□ -1.57
VPS25-204ENST00000589577 SAMD5Q5TGI4 173 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 REEP3Q6NUK4 255 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 BRICD5Q6PL45 260 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 C6orf89Q6UWU4 347 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 PATL1Q86TB9 770 aaKnown RBP5.25□□□□□ -1.57
VPS25-204ENST00000589577 SERPINA11Q86U17 422 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 RETREG3Q86VR2 466 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 BCL6BQ8N143 479 aaPredicted RBP5.25□□□□□ -1.57
VPS25-204ENST00000589577 TEX29Q8N6K0 151 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 KIR3DL3Q8N743 410 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 ZNF614Q8N883 585 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 HIPK4Q8NE63 616 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 BHLHE22Q8NFJ8 381 aaPredicted RBP5.25□□□□□ -1.57
VPS25-204ENST00000589577 TOR1AIP2Q8NFQ8 470 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 OR10A6Q8NH74 314 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 BBS10Q8TAM1 723 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 NANPQ8TBE9 248 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 MRAPQ8TCY5 172 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 MIPOL1Q8TD10 442 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 UBASH3BQ8TF42 649 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 NEU4Q8WWR8 484 aaPredicted RBP5.25□□□□□ -1.57
VPS25-204ENST00000589577 OIT3Q8WWZ8 545 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 PMM1Q92871 262 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 UBE2FQ969M7 185 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 CPNE4Q96A23 557 aaPredicted RBP5.25□□□□□ -1.57
VPS25-204ENST00000589577 FAM162AQ96A26 154 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 TMIGD2Q96BF3 282 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 ZNF775Q96BV0 537 aaPredicted RBP5.25□□□□□ -1.57
VPS25-204ENST00000589577 CCDC124Q96CT7 223 aaKnown RBP5.25□□□□□ -1.57
VPS25-204ENST00000589577 REXO5Q96IC2 774 aaKnown RBP5.25□□□□□ -1.57
VPS25-204ENST00000589577 MUS81Q96NY9 551 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 OR7D2Q96RA2 312 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 CDRT15Q96T59 188 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 CPPED1Q9BRF8 314 aaPredicted RBP5.25□□□□□ -1.57
VPS25-204ENST00000589577 THTPAQ9BU02 230 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 LMF2Q9BU23 707 aaKnown RBP5.25□□□□□ -1.57
VPS25-204ENST00000589577 BTBD2Q9BX70 525 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 HOXD1Q9GZZ0 328 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 RAB1BQ9H0U4 201 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 LRMDAQ9H2I8 198 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 ZMAT3Q9HA38 289 aaKnown RBP5.25□□□□□ -1.57
VPS25-204ENST00000589577 POLE3Q9NRF9 147 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 SDHAF3Q9NRP4 125 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 ADPRHL2Q9NX46 363 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 MAGEL2Q9UJ55 1249 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 ICAM5Q9UMF0 924 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 WDR45Q9Y484 360 aa5.25□□□□□ -1.57
VPS25-204ENST00000589577 RYR1P21817 5038 aa5.24□□□□□ -1.57
VPS25-204ENST00000589577 DNAH1Q9P2D7 4330 aa5.24□□□□□ -1.57
VPS25-204ENST00000589577 HERC2O95714 4834 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms