RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 A0A1W2PR80 420 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 CPSF4LA6NMK7 179 aaKnown RBP9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 FAM220BPB1ANY3 271 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 SHISA9B4DS77 424 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 M0QX08 132 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 TPST1O60507 370 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 OR6A2O95222 327 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 LY6G6DO95868 133 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 MT-ATP6P00846 226 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 BMP4P12644 408 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 CDH2P19022 906 aaPredicted RBP9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 IFNA8P32881 189 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 NTF4P34130 210 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 KLF10Q13118 480 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 ENTPD8Q5MY95 495 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 NANOGP8Q6NSW7 305 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 ZNF544Q6NX49 715 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 TTC33Q6PID6 262 aaPredicted RBP9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 EPHX4Q8IUS5 362 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 ZIC4Q8N9L1 334 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 ANKK1Q8NFD2 765 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 OR1K1Q8NGR3 316 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 VANGL1Q8TAA9 524 aaPredicted RBP9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 TAAR8Q969N4 342 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 MPP4Q96JB8 637 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 ADAD1Q96M93 576 aaKnown RBP9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 GRIP2Q9C0E4 1043 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 POLR2J2Q9GZM3 115 aaKnown RBP9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 POLR2J3Q9H1A7 115 aaKnown RBP9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 NANOGQ9H9S0 305 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 SAR1AQ9NR31 198 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 ZNF446Q9NWS9 450 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 BAG5Q9UL15 447 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 NOX1Q9Y5S8 564 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 ATP23Q9Y6H3 246 aa9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 SONP18583 2426 aaKnown RBP9.29□□□□□ -0.92
CLPTM1-211ENST00000589347 ANK3Q12955 4377 aaKnown RBP9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 CUBNO60494 3623 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 ARPC4-TTLL3A0A0A6YYG9 625 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 TRAPPC13A5PLN9 417 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 H7C1Q1 480 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 FBP2O00757 339 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 ATP8B1O43520 1251 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 CCDC22O60826 627 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 SOD3P08294 240 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 DANCRP0C864 163 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 HOXB1P14653 301 aaPredicted RBP9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 CBLP22681 906 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 CDKN1AP38936 164 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 FABP6P51161 128 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 CDH12P55289 794 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 FOXG1P55316 489 aaPredicted RBP9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 ROR2Q01974 943 aaKnown RBP9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 GUCY1A3Q02108 690 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 POU3F1Q03052 451 aaPredicted RBP9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 PUDPQ08623 228 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 PMS2P3Q13401 168 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 VEZF1Q14119 521 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 DUSP7Q16829 419 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 TBRG1Q3YBR2 411 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 LRRC23Q53EV4 343 aaPredicted RBP9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 CGB2Q6NT52 195 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 CCDC80Q76M96 950 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 DTX2Q86UW9 622 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 COMTD1Q86VU5 262 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 OR6T1Q8NGN1 323 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 OR5J2Q8NH18 312 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 LILRB1Q8NHL6 650 aaPredicted RBP9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 MAGEE2Q8TD90 523 aaPredicted RBP9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 ADAMTS16Q8TE57 1224 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 IGFBPL1Q8WX77 278 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 NEUROG1Q92886 237 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 TAMM41Q96BW9 452 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 BOD1Q96IK1 185 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 DHRS9Q9BPW9 319 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 TRAF4Q9BUZ4 470 aaPredicted RBP9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 SLC19A3Q9BZV2 496 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 NSRP1Q9H0G5 558 aaKnown RBP9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 CBLN4Q9NTU7 201 aa9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 MRPL39Q9NYK5 338 aaKnown RBP9.28□□□□□ -0.92
CLPTM1-211ENST00000589347 ALPK2Q86TB3 2170 aa9.27□□□□□ -0.92
CLPTM1-211ENST00000589347 LOC102725191A0A1B0GVB3 256 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 ZNF726A6NNF4 738 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 RPL36A-HNRNPH2H7BZ11 118 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 OVOL3O00110 214 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 FXYD1O00168 92 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 TRAF3IP2O43734 574 aaPredicted RBP9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 ENTPD5O75356 428 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 UPK3AO75631 287 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 BGLAPP02818 100 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 HIST1H2ABP04908 130 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 UMPSP11172 480 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 AHCYP23526 432 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 PCSK6P29122 969 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 MDH1P40925 334 aaKnown RBP9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 TAS2R41P59536 307 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 SLC25A3Q00325 362 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 SPOCK1Q08629 439 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 SF3A3Q12874 501 aaKnown RBP eCLIP9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 CLEC12BQ2HXU8 276 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms