RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	C8orf82	Q6P1X6	216 aa	Predicted RBP	11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	NIPAL3	Q6P499	406 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	H1FNT	Q75WM6	255 aa	Predicted RBP	11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	ARPIN	Q7Z6K5	226 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	WDR31	Q8NA23	367 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	OR2T12	Q8NG77	320 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	SLC26A7	Q8TE54	656 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	NEUROG1	Q92886	237 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	BOD1	Q96IK1	185 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	LINC00470	Q9BZP3	86 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	CMTM6	Q9NX76	183 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	MRPL39	Q9NYK5	338 aa	Known RBP	11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	USF3	Q68DE3	2245 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760		A0A1W2PR80	420 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	OR6C65	A6NJZ3	312 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	SHISA9	B4DS77	424 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	ZNF587B	E7ETH6	402 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	LRRN3	E7EW58	273 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	ABCD4	O14678	606 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	UPK3A	O75631	287 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	HPR	P00739	348 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	ZNF43	P17038	809 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	TNFRSF1B	P20333	461 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	LSP1	P33241	339 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	CLDN17	P56750	224 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	ZNF672	Q499Z4	452 aa	Predicted RBP	11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	CARM1	Q86X55	608 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	SLC15A3	Q8IY34	581 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	MICU2	Q8IYU8	434 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	PROX1	Q92786	737 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	FBXW5	Q969U6	566 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	ELAC2	Q9BQ52	826 aa	Known RBP	11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	ASPN	Q9BXN1	380 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	GSX2	Q9BZM3	304 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	MYLK2	Q9H1R3	596 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	SLC17A5	Q9NRA2	495 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	GMPR2	Q9P2T1	348 aa	Known RBP	11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	BAG5	Q9UL15	447 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	SLC7A7	Q9UM01	511 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	AMDHD2	Q9Y303	409 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	SH3GLB1	Q9Y371	365 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	FBN1	P35555	2871 aa	Known RBP	11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	COL6A5	A8TX70	2615 aa		11.66	□□□□□ -0.54
SREBF1-223	ENST00000584760	HIVEP2	P31629	2446 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	MS4A18	H0YCH9	400 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	NME4	O00746	187 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	SNX3	O60493	162 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	MT-ATP6	P00846	226 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	DANCR	P0C864	163 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	NQO1	P15559	274 aa	Known RBP	11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	PAX1	P15863	534 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	DRD4	P21917	467 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	CD40	P25942	277 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	KDELR2	P33947	212 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	ZNF83	P51522	516 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	SPOCK1	Q08629	439 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	ZNF74	Q16587	644 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	MS4A18	Q3C1V0	323 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	LRRC23	Q53EV4	343 aa	Predicted RBP	11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	CYBRD1	Q53TN4	286 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	C1QTNF12	Q5T7M4	302 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	TMEM108	Q6UXF1	575 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	NHLRC1	Q6VVB1	395 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	HACD2	Q6Y1H2	254 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	TMEM123	Q8N131	208 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	OR1K1	Q8NGR3	316 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	MPP4	Q96JB8	637 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	OR2M2	Q96R28	347 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	PRSS27	Q9BQR3	290 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	NELFA	Q9H3P2	528 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	ZNF701	Q9NV72	531 aa	Predicted RBP	11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	AP3M1	Q9Y2T2	418 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	RTTN	Q86VV8	2226 aa		11.65	□□□□□ -0.54
SREBF1-223	ENST00000584760	ELOVL7	A1L3X0	281 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	AKAP8	O43823	692 aa	Known RBP	11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	TMCC2	O75069	709 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	CRLF1	O75462	422 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	KRT33A	O76009	404 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	IFNA14	P01570	189 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	SOD3	P08294	240 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	HLA-DOB	P13765	273 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	CDH2	P19022	906 aa	Predicted RBP	11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	PTAFR	P25105	342 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	PTH2R	P49190	550 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	NUDT2	P50583	147 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	SLC7A2	P52569	658 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	SH3BGR	P55822	239 aa	Predicted RBP	11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	ROR2	Q01974	943 aa	Known RBP	11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	POU3F1	Q03052	451 aa	Predicted RBP	11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	PUDP	Q08623	228 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	PMS2P3	Q13401	168 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	C1D	Q13901	141 aa	Known RBP	11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	PGGHG	Q32M88	737 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	HIKESHI	Q53FT3	197 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	TTC33	Q6PID6	262 aa	Predicted RBP	11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	KLHL17	Q6TDP4	642 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	UEVLD	Q8IX04	471 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	TMEM171	Q8WVE6	324 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	SLC19A3	Q9BZV2	496 aa		11.64	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms