RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 NDEL1Q9GZM8 345 aa11.59□□□□□ -0.55
CNOT1-217ENST00000569263 PLSCR4Q9NRQ2 329 aa11.59□□□□□ -0.55
CNOT1-217ENST00000569263 PARPBPQ9NWS1 579 aa11.59□□□□□ -0.55
CNOT1-217ENST00000569263 JKAMPQ9P055 326 aa11.59□□□□□ -0.55
CNOT1-217ENST00000569263 B3GAT1Q9P2W7 334 aa11.59□□□□□ -0.55
CNOT1-217ENST00000569263 KLF2Q9Y5W3 355 aaPredicted RBP11.59□□□□□ -0.55
CNOT1-217ENST00000569263 U3KQV3 271 aa11.59□□□□□ -0.55
CNOT1-217ENST00000569263 DOPEY1Q5JWR5 2465 aa11.59□□□□□ -0.55
CNOT1-217ENST00000569263 LOC102725191A0A1B0GVB3 256 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 A8MXE2 369 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 MS4A18H0YCH9 400 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 DEAF1O75398 565 aaPredicted RBP11.58□□□□□ -0.56
CNOT1-217ENST00000569263 TIPRLO75663 272 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 CCNB2O95067 398 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 CGAP01215 116 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 ACTR3P61158 418 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 RPL18Q07020 188 aaKnown RBP11.58□□□□□ -0.56
CNOT1-217ENST00000569263 ZP4Q12836 540 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 PPP1R8Q12972 351 aaKnown RBP11.58□□□□□ -0.56
CNOT1-217ENST00000569263 GK3PQ14409 553 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 TAF11Q15544 211 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 MS4A18Q3C1V0 323 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 ANKDD1AQ495B1 522 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 NIPAL3Q6P499 406 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 BEND4Q6ZU67 534 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 TMPRSS11FQ6ZWK6 438 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 PXKQ7Z7A4 578 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 UBE2J2Q8N2K1 259 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 ZNF610Q8N9Z0 462 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 RNASE6Q93091 150 aaKnown RBP11.58□□□□□ -0.56
CNOT1-217ENST00000569263 ZNF385AQ96PM9 386 aaKnown RBP11.58□□□□□ -0.56
CNOT1-217ENST00000569263 GALNT8Q9NY28 637 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 VNN3Q9NY84 501 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 DNAJB9Q9UBS3 223 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 FOXD3Q9UJU5 478 aaPredicted RBP11.58□□□□□ -0.56
CNOT1-217ENST00000569263 AP4S1Q9Y587 144 aa11.58□□□□□ -0.56
CNOT1-217ENST00000569263 TRAV27A0A087WT01 109 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 A0A1W2PRG6 482 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 UNC119BA6NIH7 251 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 MCIDASD6RGH6 385 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 TRAF3IP2O43734 574 aaPredicted RBP11.57□□□□□ -0.56
CNOT1-217ENST00000569263 CLDN1O95832 211 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 FCGR1AP12314 374 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 POU2F1P14859 743 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 AQP2P41181 271 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 OMPP47874 163 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 LIMS1P48059 325 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 HMGA2P52926 109 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 LAPTM4AQ15012 233 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 FBXL19-AS1Q494R0 122 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 ALG10Q5BKT4 473 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 EPHX4Q8IUS5 362 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 C10orf67Q8IYJ2 551 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 ZIC4Q8N9L1 334 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 OR4C15Q8NGM1 316 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 OR51A7Q8NH64 312 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 INIPQ9NRY2 104 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 ARMC1Q9NVT9 282 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 TAS2R5Q9NYW4 299 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 UPB1Q9UBR1 384 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 PRSS50Q9UI38 385 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 RCE1Q9Y256 329 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 HIF3AQ9Y2N7 669 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 LRRK2Q5S007 2527 aa11.57□□□□□ -0.56
CNOT1-217ENST00000569263 ZNF726A6NNF4 738 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 CDC42EP2O14613 210 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 CLOCKO15516 846 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 HNRNPRO43390 633 aaKnown RBP11.56□□□□□ -0.56
CNOT1-217ENST00000569263 KRT33AO76009 404 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 IGHV3-9P01782 118 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 F13BP05160 661 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 HLA-DOBP13765 273 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 IFNGR1P15260 489 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 FPR3P25089 353 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 FASP25445 335 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 DNAJA1P31689 397 aaKnown RBP11.56□□□□□ -0.56
CNOT1-217ENST00000569263 RPL4P36578 427 aaKnown RBP11.56□□□□□ -0.56
CNOT1-217ENST00000569263 CD79BP40259 229 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 SELENOPP49908 381 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 ARHGDIAP52565 204 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 PRPS1P60891 318 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 RPS4XP62701 263 aaKnown RBP11.56□□□□□ -0.56
CNOT1-217ENST00000569263 TFF3Q07654 80 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 MICAQ29983 383 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 ZBED5Q49AG3 693 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 PGBD2Q6P3X8 592 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 ZNF474Q6S9Z5 364 aaPredicted RBP11.56□□□□□ -0.56
CNOT1-217ENST00000569263 SLC35D2Q76EJ3 337 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 ZER1Q7Z7L7 766 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 KIF18BQ86Y91 864 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 AQP11Q8NBQ7 271 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 OR10G2Q8NGC3 310 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 OR9Q2Q8NGE9 314 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 MOSPD2Q8NHP6 518 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 FANK1Q8TC84 345 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 GNPDA2Q8TDQ7 276 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 GIPC3Q8TF64 312 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 PYDC1Q8WXC3 89 aa11.56□□□□□ -0.56
CNOT1-217ENST00000569263 DUS3LQ96G46 650 aaKnown RBP11.56□□□□□ -0.56
CNOT1-217ENST00000569263 TNFRSF13CQ96RJ3 184 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms