RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 OR51A7Q8NH64 312 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 FANK1Q8TC84 345 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 DNAJA4Q8WW22 397 aaPredicted RBP4.67□□□□□ -1.66
SPG11-220ENST00000559933 CYGBQ8WWM9 190 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 ST8SIA1Q92185 356 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 TM9SF4Q92544 642 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 SLC35B4Q969S0 331 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 ZBTB8AQ96BR9 441 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 SDCCAG3Q96C92 435 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 BPIFA2Q96DR5 249 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 SGTBQ96EQ0 304 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 MRGPRX4Q96LA9 322 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 SAMD8Q96LT4 415 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 JMJD8Q96S16 334 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 PIGQQ9BRB3 760 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 C9orf16Q9BUW7 83 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 OSBPL10Q9BXB5 764 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 KLHL4Q9C0H6 718 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 TOR3AQ9H497 397 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 LDAHQ9H6V9 325 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 EXO5Q9H790 373 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 CNTD2Q9H8S5 307 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 ZDHHC11Q9H8X9 412 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 MCCC2Q9HCC0 563 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 KRT84Q9NSB2 600 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 B4GALT7Q9UBV7 327 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 TMCC3Q9ULS5 477 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 MED31Q9Y3C7 131 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 ZFYVE26Q68DK2 2539 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 IGSF10Q6WRI0 2623 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 TRAV36DV7A0A075B6V5 113 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 A0A087WZY1 265 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 TRGV5A0A0B4J1U4 118 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 A0A1B0GTH9 108 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 LIPT2A6NK58 231 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 A8MVM7 634 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 EFCAB9A8MZ26 197 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 FTCDNL1E5RQL4 147 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 NPIPA2E9PIF3 369 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 NPIPA3F8WFD2 350 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 H3BN98 237 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 H7C1C5 153 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 ACOT7O00154 380 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 AHSA1O95433 338 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 SLC2A10O95528 541 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 PPP1R3DO95685 299 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 THRBP10828 461 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 PNMTP11086 282 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 ENPP1P22413 925 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 CHMP24386 653 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 FPR3P25089 353 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 IFNA8P32881 189 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 IDUAP35475 653 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 VHLP40337 213 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 AQP2P41181 271 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 APOBEC1P41238 236 aaKnown RBP4.66□□□□□ -1.66
SPG11-220ENST00000559933 RBM34P42696 430 aaKnown RBP4.66□□□□□ -1.66
SPG11-220ENST00000559933 P2RY4P51582 365 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 CTBP2P56545 445 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 CLDN18P56856 261 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 OR2B6P58173 313 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 SMIM11AP58511 58 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 LCN6P62502 163 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 ERVK-25P63136 954 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 PRKCDQ05655 676 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 NFATC3Q12968 1075 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 TOP3AQ13472 1001 aaPredicted RBP4.66□□□□□ -1.66
SPG11-220ENST00000559933 MELKQ14680 651 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 HYAL4Q2M3T9 481 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 OTPQ5XKR4 325 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 C1orf94Q6P1W5 598 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 ZNF620Q6ZNG0 422 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 NANOGNBQ7Z5D8 188 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 CCDC71Q8IV32 467 aaPredicted RBP4.66□□□□□ -1.66
SPG11-220ENST00000559933 CCDC103Q8IW40 242 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 CHERPQ8IWX8 916 aaKnown RBP4.66□□□□□ -1.66
SPG11-220ENST00000559933 RPRMLQ8N4K4 120 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 CLDN22Q8N7P3 220 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 TMEM99Q8N816 258 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 OR10D3Q8NH80 312 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 NEIL3Q8TAT5 605 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 ZPLD1Q8TCW7 415 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 GNPDA2Q8TDQ7 276 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 TMEM234Q8WY98 164 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 ROBO4Q8WZ75 1007 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 POP5Q969H6 163 aaKnown RBP4.66□□□□□ -1.66
SPG11-220ENST00000559933 ABTB1Q969K4 478 aaPredicted RBP4.66□□□□□ -1.66
SPG11-220ENST00000559933 PNPLA2Q96AD5 504 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 DDIT4LQ96D03 193 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 RASD2Q96D21 266 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 SNRNP40Q96DI7 357 aaKnown RBP4.66□□□□□ -1.66
SPG11-220ENST00000559933 MPP4Q96JB8 637 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 ADGRG7Q96K78 797 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 KLHL15Q96M94 604 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 ZNF570Q96NI8 536 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 BBC3Q96PG8 261 aaPredicted RBP4.66□□□□□ -1.66
SPG11-220ENST00000559933 TNFRSF13CQ96RJ3 184 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 RBM4BQ9BQ04 359 aaKnown RBP4.66□□□□□ -1.66
SPG11-220ENST00000559933 PSD2Q9BQI7 771 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 TMEM43Q9BTV4 400 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms