RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 SMPD2O60906 423 aa17.97■□□□□ 0.47
VTI1B-205ENST00000555543 KRT33AO76009 404 aa17.97■□□□□ 0.47
VTI1B-205ENST00000555543 IFNA14P01570 189 aa17.97■□□□□ 0.47
VTI1B-205ENST00000555543 TGFBR3Q03167 851 aa17.97■□□□□ 0.47
VTI1B-205ENST00000555543 FOXD4Q12950 439 aaPredicted RBP17.97■□□□□ 0.47
VTI1B-205ENST00000555543 ZNF672Q499Z4 452 aaPredicted RBP17.97■□□□□ 0.47
VTI1B-205ENST00000555543 HIKESHIQ53FT3 197 aa17.97■□□□□ 0.47
VTI1B-205ENST00000555543 NHLRC1Q6VVB1 395 aa17.97■□□□□ 0.47
VTI1B-205ENST00000555543 HACD2Q6Y1H2 254 aa17.97■□□□□ 0.47
VTI1B-205ENST00000555543 DEF8Q6ZN54 512 aa17.97■□□□□ 0.47
VTI1B-205ENST00000555543 CPLX4Q7Z7G2 160 aa17.97■□□□□ 0.47
VTI1B-205ENST00000555543 TMEM123Q8N131 208 aa17.97■□□□□ 0.47
VTI1B-205ENST00000555543 OR2M2Q96R28 347 aa17.97■□□□□ 0.47
VTI1B-205ENST00000555543 TMUB1Q9BVT8 246 aa17.97■□□□□ 0.47
VTI1B-205ENST00000555543 C1QTNF6Q9BXI9 259 aa17.97■□□□□ 0.47
VTI1B-205ENST00000555543 LINC00470Q9BZP3 86 aa17.97■□□□□ 0.47
VTI1B-205ENST00000555543 EFCAB1Q9HAE3 211 aa17.97■□□□□ 0.47
VTI1B-205ENST00000555543 ARID1AO14497 2285 aa17.96■□□□□ 0.47
VTI1B-205ENST00000555543 PLPP3O14495 311 aa17.96■□□□□ 0.47
VTI1B-205ENST00000555543 GSK3BP49841 420 aa17.96■□□□□ 0.47
VTI1B-205ENST00000555543 NKX6-1P78426 367 aaPredicted RBP17.96■□□□□ 0.47
VTI1B-205ENST00000555543 POU3F1Q03052 451 aaPredicted RBP17.96■□□□□ 0.47
VTI1B-205ENST00000555543 PUDPQ08623 228 aa17.96■□□□□ 0.47
VTI1B-205ENST00000555543 PMS2P3Q13401 168 aa17.96■□□□□ 0.47
VTI1B-205ENST00000555543 ZNF74Q16587 644 aa17.96■□□□□ 0.47
VTI1B-205ENST00000555543 TTC33Q6PID6 262 aaPredicted RBP17.96■□□□□ 0.47
VTI1B-205ENST00000555543 ABHD12BQ7Z5M8 362 aaPredicted RBP17.96■□□□□ 0.47
VTI1B-205ENST00000555543 UEVLDQ8IX04 471 aa17.96■□□□□ 0.47
VTI1B-205ENST00000555543 OR1K1Q8NGR3 316 aa17.96■□□□□ 0.47
VTI1B-205ENST00000555543 FBXW5Q969U6 566 aa17.96■□□□□ 0.47
VTI1B-205ENST00000555543 BOD1Q96IK1 185 aa17.96■□□□□ 0.47
VTI1B-205ENST00000555543 TPD52L3Q96J77 140 aa17.96■□□□□ 0.47
VTI1B-205ENST00000555543 MPP4Q96JB8 637 aa17.96■□□□□ 0.47
VTI1B-205ENST00000555543 HOPXQ9BPY8 73 aaPredicted RBP17.96■□□□□ 0.47
VTI1B-205ENST00000555543 MEPEQ9NQ76 525 aaPredicted RBP17.96■□□□□ 0.47
VTI1B-205ENST00000555543 MED29Q9NX70 200 aa17.96■□□□□ 0.47
VTI1B-205ENST00000555543 AP3M1Q9Y2T2 418 aa17.96■□□□□ 0.47
VTI1B-205ENST00000555543 AMDHD2Q9Y303 409 aa17.96■□□□□ 0.47
VTI1B-205ENST00000555543 OR6C65A6NJZ3 312 aa17.95■□□□□ 0.46
VTI1B-205ENST00000555543 M0R1B8 84 aa17.95■□□□□ 0.46
VTI1B-205ENST00000555543 SLC43A1O75387 559 aa17.95■□□□□ 0.46
VTI1B-205ENST00000555543 CH25HO95992 272 aa17.95■□□□□ 0.46
VTI1B-205ENST00000555543 MT-ATP6P00846 226 aa17.95■□□□□ 0.46
VTI1B-205ENST00000555543 ROR2Q01974 943 aaKnown RBP17.95■□□□□ 0.46
VTI1B-205ENST00000555543 PIN1Q13526 163 aaPredicted RBP17.95■□□□□ 0.46
VTI1B-205ENST00000555543 NKAIN4Q8IVV8 208 aa17.95■□□□□ 0.46
VTI1B-205ENST00000555543 LRRC75A-AS1Q8N1F1 130 aa17.95■□□□□ 0.46
VTI1B-205ENST00000555543 LRRC17Q8N6Y2 441 aa17.95■□□□□ 0.46
VTI1B-205ENST00000555543 OR5J2Q8NH18 312 aa17.95■□□□□ 0.46
VTI1B-205ENST00000555543 CMTM5Q96DZ9 223 aa17.95■□□□□ 0.46
VTI1B-205ENST00000555543 ZNF837Q96EG3 531 aaPredicted RBP17.95■□□□□ 0.46
VTI1B-205ENST00000555543 PERPQ96FX8 193 aa17.95■□□□□ 0.46
VTI1B-205ENST00000555543 TXNDC15Q96J42 360 aa17.95■□□□□ 0.46
VTI1B-205ENST00000555543 EMC6Q9BV81 110 aa17.95■□□□□ 0.46
VTI1B-205ENST00000555543 NELFAQ9H3P2 528 aa17.95■□□□□ 0.46
VTI1B-205ENST00000555543 ALG2Q9H553 416 aa17.95■□□□□ 0.46
VTI1B-205ENST00000555543 CXCR6O00574 342 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 OR5F1O95221 314 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 SOD3P08294 240 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 DANCRP0C864 163 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 CD99P14209 185 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 CD40P25942 277 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 PRDX6P30041 224 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 UGT2B15P54855 530 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 CDH11P55287 796 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 TAS2R41P59536 307 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 SELENOWP63302 87 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 TBRG1Q3YBR2 411 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 Q5PR19 223 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 PHYHD1Q5SRE7 291 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 CARD17Q5XLA6 110 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 TMEM108Q6UXF1 575 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 SLC46A3Q7Z3Q1 461 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 VTCN1Q7Z7D3 282 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 PFN4Q8NHR9 129 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 TMEM255BQ8WV15 326 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 BCL2L2Q92843 193 aaPredicted RBP17.94■□□□□ 0.46
VTI1B-205ENST00000555543 SLC19A3Q9BZV2 496 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 FKRPQ9H9S5 495 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 ABCD2Q9UBJ2 740 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 RIMS3Q9UJD0 308 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 LAMP3Q9UQV4 416 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 NOX1Q9Y5S8 564 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 USF3Q68DE3 2245 aa17.94■□□□□ 0.46
VTI1B-205ENST00000555543 PLCE1Q9P212 2302 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 ALPK2Q86TB3 2170 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 C11orf98E9PRG8 122 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 RPL36A-HNRNPH2H7BZ11 118 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 AKAP8O43823 692 aaKnown RBP17.93■□□□□ 0.46
VTI1B-205ENST00000555543 SERPINI2O75830 405 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 ADORA3P0DMS8 318 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 FUT4P22083 530 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 AHCYP23526 432 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 PTAFRP25105 342 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 PTH2RP49190 550 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 PSME3P61289 254 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 PGGHGQ32M88 737 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 HMBOX1Q6NT76 420 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 KLHL17Q6TDP4 642 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 PIAS4Q8N2W9 510 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms