RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 EXOSC3Q9NQT5 275 aaKnown RBP6.26□□□□□ -1.41
ATXN3-219ENST00000553488 PARPBPQ9NWS1 579 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 FBXO9Q9UK97 447 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-219ENST00000553488 MKLN1Q9UL63 735 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 PCDHGB4Q9UN71 923 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 SLC35A3Q9Y2D2 325 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 DNAJC15Q9Y5T4 150 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 NBEAL2Q6ZNJ1 2754 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 TMED7-TICAM2A0A0A6YYA0 188 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 IGHV2OR16-5A0A0B4J2B6 119 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 A0A0G2JK05 382 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 AQP7P3A6NL99 342 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 CLDN24A6NM45 220 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 TMEM233B4DJY2 109 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 NR5A2O00482 541 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 AP3D1O14617 1153 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 WNT9BO14905 357 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 ZNF208O43345 1280 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 PLIN3O60664 434 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 GLRA3O75311 464 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 TFP02787 698 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 GUSBP08236 651 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 LINC00032P0C843 101 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 SAGP10523 405 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-219ENST00000553488 NPR2P20594 1047 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 PAX7P23759 505 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 FKBP2P26885 142 aaKnown RBP6.25□□□□□ -1.41
ATXN3-219ENST00000553488 RYKP34925 604 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 RPL3P39023 403 aaKnown RBP6.25□□□□□ -1.41
ATXN3-219ENST00000553488 SELENOPP49908 381 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 GYS2P54840 703 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 HBA1P69905 142 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 IL1RL1Q01638 556 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 SCGB2A2Q13296 93 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 ADRM1Q16186 407 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 UGT3A2Q3SY77 523 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 SPDYE7PQ495Y7 208 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 GALNTL6Q49A17 601 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 OTUD3Q5T2D3 398 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-219ENST00000553488 FOXB2Q5VYV0 432 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 AAED1Q7RTV5 226 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 SPATA21Q7Z572 469 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 RIMKLAQ8IXN7 391 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 KRTCAP2Q8N6L1 136 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 TMEM99Q8N816 258 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 ZDHHC22Q8N966 263 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 ZNF563Q8TA94 476 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 MIPOL1Q8TD10 442 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 CKAP2Q8WWK9 683 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 COQ8BQ96D53 544 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 ZNF317Q96PQ6 595 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-219ENST00000553488 SPATA25Q9BR10 227 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 ZNF747Q9BV97 191 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 SF3B5Q9BWJ5 86 aaKnown RBP6.25□□□□□ -1.41
ATXN3-219ENST00000553488 JAM3Q9BX67 310 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 TPK1Q9H3S4 243 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 LPAR2Q9HBW0 351 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 NOX3Q9HBY0 568 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 G6PC2Q9NQR9 355 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 OXSMQ9NWU1 459 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 OSGIN1Q9UJX0 560 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 USP22Q9UPT9 525 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 TMED7Q9Y3B3 224 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 FIS1Q9Y3D6 152 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 GRIP1Q9Y3R0 1128 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 PCDHGB1Q9Y5G3 927 aa6.25□□□□□ -1.41
ATXN3-219ENST00000553488 LOC105371242A0A075B767 164 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 RNF103-CHMP3A0A140T963 221 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 LIPT2A6NK58 231 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 ZNF587BE7ETH6 402 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 PIP5K1BO14986 540 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 UPK3AO75631 287 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 NCR1O76036 304 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 AKR7A3O95154 331 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 PNPP00491 289 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 FSHBP01225 129 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 ERCC1P07992 297 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-219ENST00000553488 ADRA2AP08913 450 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 GAAP10253 952 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 DDX5P17844 614 aaKnown RBP6.24□□□□□ -1.41
ATXN3-219ENST00000553488 CCNA2P20248 432 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 MATN1P21941 496 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 SOAT1P35610 550 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 HTR3AP46098 478 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 POLR2HP52434 150 aaKnown RBP6.24□□□□□ -1.41
ATXN3-219ENST00000553488 LMO4P61968 165 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 DEFA6Q01524 100 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 SNTB2Q13425 540 aaKnown RBP6.24□□□□□ -1.41
ATXN3-219ENST00000553488 PCLAFQ15004 111 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 LSM12Q3MHD2 195 aaKnown RBP6.24□□□□□ -1.41
ATXN3-219ENST00000553488 FAM153CQ494X1 144 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 CFAP157Q5JU67 520 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 SHQ1Q6PI26 577 aaKnown RBP6.24□□□□□ -1.41
ATXN3-219ENST00000553488 CD300LDQ6UXZ3 194 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 C1QL2Q7Z5L3 287 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 ABHD12BQ7Z5M8 362 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-219ENST00000553488 HMGN2P46Q86SG4 172 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 CLECL1Q8IZS7 167 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 CLEC4FQ8N1N0 589 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 NATD1Q8N6N6 113 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms