RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 TMEM200CA6NKL6 621 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 A8MVM7 634 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 SEC14L5O43304 696 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 RENP00797 406 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 CSF3P09919 207 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 FGF5P12034 268 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 EDNRAP25101 427 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 PTBP1P26599 531 aaKnown RBP eCLIP12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 SCN1BQ07699 218 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 SIGLEC14Q08ET2 396 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 CLPPQ16740 277 aaPredicted RBP12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 CCDC58Q4VC31 144 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 IDNKQ5T6J7 187 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 FAM69AQ5T7M9 428 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 TMEM205Q6UW68 189 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 PAMR1Q6UXH9 720 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 BPHLQ86WA6 291 aaPredicted RBP12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 STK35Q8TDR2 534 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 HGDQ93099 445 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 SLC25A36Q96CQ1 311 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 DNAJA3Q96EY1 480 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 CRB3Q9BUF7 120 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 ACOXLQ9NUZ1 547 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 WDR70Q9NW82 654 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 TRBV2A0A0J9YWF9 115 aa12.69□□□□□ -0.38
RAB3IP-216ENST00000552199 DCTN6O00399 190 aa12.69□□□□□ -0.38
RAB3IP-216ENST00000552199 SLC19A2O60779 497 aa12.69□□□□□ -0.38
RAB3IP-216ENST00000552199 NAGAP17050 411 aa12.69□□□□□ -0.38
RAB3IP-216ENST00000552199 HOXD12P35452 270 aa12.69□□□□□ -0.38
RAB3IP-216ENST00000552199 HTR3AP46098 478 aa12.69□□□□□ -0.38
RAB3IP-216ENST00000552199 C17orf67Q0P5P2 114 aa12.69□□□□□ -0.38
RAB3IP-216ENST00000552199 SGCBQ16585 318 aa12.69□□□□□ -0.38
RAB3IP-216ENST00000552199 ZNF684Q5T5D7 378 aa12.69□□□□□ -0.38
RAB3IP-216ENST00000552199 C1orf140Q5VVS0 124 aa12.69□□□□□ -0.38
RAB3IP-216ENST00000552199 OR5L2Q8NGL0 311 aa12.69□□□□□ -0.38
RAB3IP-216ENST00000552199 OR13C5Q8NGS8 318 aa12.69□□□□□ -0.38
RAB3IP-216ENST00000552199 OR2T4Q8NH00 348 aa12.69□□□□□ -0.38
RAB3IP-216ENST00000552199 OR8K3Q8NH51 312 aa12.69□□□□□ -0.38
RAB3IP-216ENST00000552199 CEP76Q8TAP6 659 aa12.69□□□□□ -0.38
RAB3IP-216ENST00000552199 KCTD12Q96CX2 325 aaKnown RBP12.69□□□□□ -0.38
RAB3IP-216ENST00000552199 CTRCQ99895 268 aa12.69□□□□□ -0.38
RAB3IP-216ENST00000552199 ADAM30Q9UKF2 790 aa12.69□□□□□ -0.38
RAB3IP-216ENST00000552199 TRAV1-2A0A0B4J238 106 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 A0A0G2JK05 382 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 ANKUB1A6NFN9 424 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 C11orf98E9PRG8 122 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 H7C1C5 153 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 MEN1O00255 615 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 SNPHO15079 494 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 SSX4O60224 188 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 DXOO77932 396 aaKnown RBP12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 CER1O95813 267 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 APEX1P27695 318 aaKnown RBP12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 GRPRP30550 384 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 PSMB10P40306 273 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 DUSP3P51452 185 aaPredicted RBP12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 LCN6P62502 163 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 CD300CQ08708 224 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 IL11RAQ14626 422 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 MRPL14Q6P1L8 145 aaKnown RBP12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 TIGD4Q8IY51 512 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 OR6V1Q8N148 313 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 RPS4Y2Q8TD47 263 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 TMEM234Q8WY98 164 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 ITPKCQ96DU7 683 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 INIPQ9NRY2 104 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 C2orf72A6NCS6 295 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 PRR32B1ATL7 298 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 NTN3O00634 580 aaPredicted RBP12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 ARHGEF9O43307 516 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 ZFAND5O76080 213 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 THBS2P35442 1172 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 RFX2P48378 723 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 OR10A3P58181 314 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 RPS11P62280 158 aaKnown RBP eCLIP12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 MADCAM1Q13477 382 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 ASAH1Q13510 395 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 TAB1Q15750 504 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 EEF1A1P5Q5VTE0 462 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 OR5M10Q6IEU7 315 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 SFXN4Q6P4A7 337 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 C5orf46Q6UWT4 87 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 UNQ9370/PRO34162Q6UXP9 181 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 PRR23CQ6ZRP0 262 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 SPATC1Q76KD6 591 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 KCTD20Q7Z5Y7 419 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 NRARPQ7Z6K4 114 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 CDC20BQ86Y33 519 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 RNF138Q8WVD3 245 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 ST8SIA1Q92185 356 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 TTC9Q92623 222 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 C8orf44Q96CB5 159 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 ADAD1Q96M93 576 aaKnown RBP12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 TTYH2Q9BSA4 534 aa12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 AKIRIN1Q9H9L7 192 aaPredicted RBP12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 C19orf25Q9UFG5 118 aaPredicted RBP12.68□□□□□ -0.38
RAB3IP-216ENST00000552199 VCANP13611 3396 aa12.67□□□□□ -0.38
RAB3IP-216ENST00000552199 D6RAR5 112 aa12.67□□□□□ -0.38
RAB3IP-216ENST00000552199 GPRIN2O60269 458 aa12.67□□□□□ -0.38
RAB3IP-216ENST00000552199 GATBO75879 557 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms