RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 FAM69AQ5T7M9 428 aa9.82□□□□□ -0.84
NECAP1-206ENST00000542095 LYPD4Q6UWN0 246 aa9.82□□□□□ -0.84
NECAP1-206ENST00000542095 LRRC28Q86X40 367 aaPredicted RBP9.82□□□□□ -0.84
NECAP1-206ENST00000542095 EID2Q8N6I1 236 aa9.82□□□□□ -0.84
NECAP1-206ENST00000542095 ZNF511Q8NB15 262 aa9.82□□□□□ -0.84
NECAP1-206ENST00000542095 DUSP19Q8WTR2 217 aa9.82□□□□□ -0.84
NECAP1-206ENST00000542095 TSSK2Q96PF2 358 aa9.82□□□□□ -0.84
NECAP1-206ENST00000542095 UBL7Q96S82 380 aaPredicted RBP9.82□□□□□ -0.84
NECAP1-206ENST00000542095 GAREM1Q9H706 876 aa9.82□□□□□ -0.84
NECAP1-206ENST00000542095 SACM1LQ9NTJ5 587 aa9.82□□□□□ -0.84
NECAP1-206ENST00000542095 EXTL2Q9UBQ6 330 aa9.82□□□□□ -0.84
NECAP1-206ENST00000542095 ZNF346Q9UL40 294 aaKnown RBP9.82□□□□□ -0.84
NECAP1-206ENST00000542095 LAMA1P25391 3075 aa9.82□□□□□ -0.84
NECAP1-206ENST00000542095 TMEM72A0PK05 275 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 A8MVM7 634 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 ONECUT2O95948 504 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 HLA-DQB1P01920 261 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 CFIP05156 583 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 TACSTD2P09758 323 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 TDGF1P13385 188 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 TALDO1P37837 337 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 HTR3AP46098 478 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 TPTEP56180 551 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 OR2B6P58173 313 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 OR10A3P58181 314 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 P2RY14Q15391 338 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 SGCBQ16585 318 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 SLC6A19Q695T7 634 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 PAPD4Q6PIY7 484 aaKnown RBP9.81□□□□□ -0.84
NECAP1-206ENST00000542095 C5orf46Q6UWT4 87 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 ZNF517Q6ZMY9 492 aaPredicted RBP9.81□□□□□ -0.84
NECAP1-206ENST00000542095 FAM220AQ7Z4H9 259 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 KCTD20Q7Z5Y7 419 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 PPP1R3BQ86XI6 285 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 ADGRG3Q86Y34 549 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 RAB43Q86YS6 212 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 EGFL6Q8IUX8 553 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 MAFAQ8NHW3 353 aaPredicted RBP9.81□□□□□ -0.84
NECAP1-206ENST00000542095 HAVCR2Q8TDQ0 301 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 STK35Q8TDR2 534 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 TMEM234Q8WY98 164 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 PHYHIPQ92561 330 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 SLC25A36Q96CQ1 311 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 NEDD4LQ96PU5 975 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 PTDSS2Q9BVG9 487 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 SRA1Q9HD15 236 aaKnown RBP9.81□□□□□ -0.84
NECAP1-206ENST00000542095 NPAP1Q9NZP6 1156 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 PPIEQ9UNP9 301 aaKnown RBP9.81□□□□□ -0.84
NECAP1-206ENST00000542095 RASD1Q9Y272 281 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 COL6A3P12111 3177 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 A0A0G2JK05 382 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 VSTM2BA6NLU5 285 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 XKRYO14609 159 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 LAMTOR5O43504 91 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 TRIM3O75382 744 aaPredicted RBP9.81□□□□□ -0.84
NECAP1-206ENST00000542095 PRKCAP17252 672 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 ELK1P19419 428 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 GRPRP30550 384 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 THBS2P35442 1172 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 PSMB10P40306 273 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 CASP3P42574 277 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 CARTPTQ16568 116 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 COL28A1Q2UY09 1125 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 C1orf140Q5VVS0 124 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 AGAP6Q5VW22 663 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 C1QL3Q5VWW1 255 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 ZNF385CQ66K41 422 aaPredicted RBP9.81□□□□□ -0.84
NECAP1-206ENST00000542095 TIGD4Q8IY51 512 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 RPS4Y2Q8TD47 263 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 ADAD1Q96M93 576 aaKnown RBP9.81□□□□□ -0.84
NECAP1-206ENST00000542095 AGAP4Q96P64 663 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 MNTQ99583 582 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 C11orf54Q9H0W9 315 aaPredicted RBP9.81□□□□□ -0.84
NECAP1-206ENST00000542095 CCDC86Q9H6F5 360 aaKnown RBP9.81□□□□□ -0.84
NECAP1-206ENST00000542095 INIPQ9NRY2 104 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 TAS2R5Q9NYW4 299 aa9.81□□□□□ -0.84
NECAP1-206ENST00000542095 TRBV11-1A0A0K0K1C0 115 aa9.8□□□□□ -0.84
NECAP1-206ENST00000542095 C11orf98E9PRG8 122 aa9.8□□□□□ -0.84
NECAP1-206ENST00000542095 H7C1C5 153 aa9.8□□□□□ -0.84
NECAP1-206ENST00000542095 FLRT2O43155 660 aa9.8□□□□□ -0.84
NECAP1-206ENST00000542095 ARHGEF9O43307 516 aa9.8□□□□□ -0.84
NECAP1-206ENST00000542095 NPIPB7O75200 414 aa9.8□□□□□ -0.84
NECAP1-206ENST00000542095 AHSA1O95433 338 aa9.8□□□□□ -0.84
NECAP1-206ENST00000542095 UCHL1P09936 223 aa9.8□□□□□ -0.84
NECAP1-206ENST00000542095 FBXW4P57775 412 aa9.8□□□□□ -0.84
NECAP1-206ENST00000542095 RPS11P62280 158 aaKnown RBP eCLIP9.8□□□□□ -0.84
NECAP1-206ENST00000542095 LCN6P62502 163 aa9.8□□□□□ -0.84
NECAP1-206ENST00000542095 C17orf67Q0P5P2 114 aa9.8□□□□□ -0.84
NECAP1-206ENST00000542095 MRPL28Q13084 256 aaKnown RBP9.8□□□□□ -0.84
NECAP1-206ENST00000542095 ZNF684Q5T5D7 378 aa9.8□□□□□ -0.84
NECAP1-206ENST00000542095 PHF19Q5T6S3 580 aa9.8□□□□□ -0.84
NECAP1-206ENST00000542095 EEF1A1P5Q5VTE0 462 aa9.8□□□□□ -0.84
NECAP1-206ENST00000542095 ZNF544Q6NX49 715 aa9.8□□□□□ -0.84
NECAP1-206ENST00000542095 C16orf47Q6ZP98 133 aaPredicted RBP9.8□□□□□ -0.84
NECAP1-206ENST00000542095 TRILQ7L0X0 811 aa9.8□□□□□ -0.84
NECAP1-206ENST00000542095 CPEB2Q7Z5Q1 589 aaKnown RBP9.8□□□□□ -0.84
NECAP1-206ENST00000542095 CDC20BQ86Y33 519 aa9.8□□□□□ -0.84
NECAP1-206ENST00000542095 UBQLNLQ8IYU4 475 aa9.8□□□□□ -0.84
NECAP1-206ENST00000542095 OR6V1Q8N148 313 aa9.8□□□□□ -0.84
NECAP1-206ENST00000542095 SAMD12Q8N8I0 201 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms