RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 RPS4Y1P22090 263 aaKnown RBP17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 PON3Q15166 354 aa17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 DUSP5Q16690 384 aa17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 DHRS7BQ6IAN0 325 aaPredicted RBP17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 BEST3Q8N1M1 668 aa17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 OR4K13Q8NH42 304 aa17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 IRF7Q92985 503 aa17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 FAM117AQ9C073 453 aa17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 C1orf198Q9H425 327 aa17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 PMS2P2O95744 297 aa17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 IFNA4P05014 189 aa17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 NANOS3P60323 173 aaKnown RBP17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 TNFRSF17Q02223 184 aa17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 LTBQ06643 244 aa17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 PGAP1Q75T13 922 aa17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 SLC35F3Q8IY50 421 aa17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 OTUB2Q96DC9 234 aa17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 ZNF350Q9GZX5 532 aa17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 PCDHB10Q9UN67 800 aa17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 HIST1H1CP16403 213 aaKnown RBP17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 POLR2GP62487 172 aaKnown RBP eCLIP17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 DCDP81605 110 aaKnown RBP17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 SNTB1Q13884 538 aaKnown RBP17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 GUCA2BQ16661 112 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 MANEAQ5SRI9 462 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 NRROSQ86YC3 692 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 CBLN2Q8IUK8 224 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 ZNF619Q8N2I2 560 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 RAB42Q8N4Z0 105 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 C12orf45Q8N5I9 185 aaPredicted RBP17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 OR2A1Q8NGT9 310 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 CCDC107Q8WV48 283 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 CHST6Q9GZX3 395 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 CHRNA9Q9UGM1 479 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 H0YC42 278 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 GTF2F2P13984 249 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 ADRA2CP18825 462 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 DIO1P49895 249 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 METAP1P53582 386 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 SCAND1P57086 179 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 IRF4Q15306 451 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 METRNLQ641Q3 311 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 GLT8D1Q68CQ7 371 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 MAMSTRQ6ZN01 415 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 ZNF75AQ96N20 296 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 TSPAN10Q9H1Z9 355 aaPredicted RBP17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 FKRPQ9H9S5 495 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 TNFSF18Q9UNG2 199 aa17.01■□□□□ 0.31
SFSWAP-207ENST00000538548 OR14I1A6ND48 311 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 IDSB3KWA1 339 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 CSF2RBP32927 897 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 TSFMP43897 325 aaKnown RBP17■□□□□ 0.31
SFSWAP-207ENST00000538548 FHL1Q13642 323 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 Q499Y3 187 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 OR1S2Q8NGQ3 325 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 GLYATL2Q8WU03 294 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 EDAQ92838 391 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 ZNF471Q9BX82 626 aaPredicted RBP17■□□□□ 0.31
SFSWAP-207ENST00000538548 GXYLT2A0PJZ3 443 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 OR5H14A6NHG9 310 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 RNGTTO60942 597 aaKnown RBP17■□□□□ 0.31
SFSWAP-207ENST00000538548 GNRH1P01148 92 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 ADCYAP1P18509 176 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 TMPRSS12Q86WS5 348 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 SYNPO2LQ9H987 977 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 PRDM9Q9NQV7 894 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 GGT3PA6NGU5 568 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 ITGB2P05107 769 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 MELTFP08582 738 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 BDKRB2P30411 391 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 ST8SIA6P61647 398 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 LRRC25Q8N386 305 aaPredicted RBP17■□□□□ 0.31
SFSWAP-207ENST00000538548 BOLLQ8N9W6 283 aaKnown RBP17■□□□□ 0.31
SFSWAP-207ENST00000538548 SFT2D1Q8WV19 159 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 COL26A1Q96A83 441 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 HSPA12BQ96MM6 686 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 VRK1Q99986 396 aaPredicted RBP17■□□□□ 0.31
SFSWAP-207ENST00000538548 POFUT1Q9H488 388 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 IL21RQ9HBE5 538 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 TMEM27Q9HBJ8 222 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 SPHK2Q9NRA0 654 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 UPB1Q9UBR1 384 aa17■□□□□ 0.31
SFSWAP-207ENST00000538548 ZNF230Q9UIE0 474 aaPredicted RBP17■□□□□ 0.31
SFSWAP-207ENST00000538548 SLC25A12O75746 678 aa16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 OR4E1P0C645 316 aa16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 SLC35G4P0C7Q5 338 aa16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 SLC25A4P12235 298 aa16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 PLA2G7Q13093 441 aa16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 TSC22D1Q15714 1073 aa16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 ANKRD16Q6P6B7 361 aa16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 GRHL3Q8TE85 626 aa16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 TM7SF3Q9NS93 570 aa16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 KCNE5Q9UJ90 142 aa16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 ZNF337Q9Y3M9 751 aa16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 PEX12O00623 359 aa16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 ITGB8P26012 769 aa16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 MNX1P50219 401 aaPredicted RBP16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 IGSF11Q5DX21 431 aa16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 C10orf91Q5T1B1 145 aa16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 LRRTM1Q86UE6 522 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms