RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 A0A1W2PPV9 198 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 RNF13O43567 381 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 CST1P01037 141 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 HPNP05981 417 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 ZNF19P17023 458 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 KITLGP21583 273 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 CMA1P23946 247 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 IFNA8P32881 189 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 ATP5C1P36542 298 aaKnown RBP3.81□□□□□ -1.8
PRKDC-208ENST00000536710 FDFT1P37268 417 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 DLX1P56177 255 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 KRTAP10-6P60371 365 aaPredicted RBP3.81□□□□□ -1.8
PRKDC-208ENST00000536710 ACVR1Q04771 509 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 ZNF763Q0D2J5 394 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 NRF1Q16656 503 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 BBS5Q8N3I7 341 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 OR2G2Q8NGZ5 317 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 NEIL3Q8TAT5 605 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 IMMP1LQ96LU5 166 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 ZIM3Q96PE6 472 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 SORT1Q99523 831 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 ADAP2Q9NPF8 381 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 IL26Q9NPH9 171 aa3.81□□□□□ -1.8
PRKDC-208ENST00000536710 ABCA7Q8IZY2 2146 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.8□□□□□ -1.8
PRKDC-208ENST00000536710 FANCIQ9NVI1 1328 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 IGLV3-22A0A075B6J6 115 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 USP27XA6NNY8 438 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 GOSR2O14653 212 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 PPP1R2P9O14990 202 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 LSM1O15116 133 aaKnown RBP3.8□□□□□ -1.8
PRKDC-208ENST00000536710 C1orf105O95561 183 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 PRDX3P30048 256 aaKnown RBP3.8□□□□□ -1.8
PRKDC-208ENST00000536710 RORAP35398 523 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 PRMT2P55345 433 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 CYTH1Q15438 398 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 ZNF630Q2M218 657 aaPredicted RBP3.8□□□□□ -1.8
PRKDC-208ENST00000536710 OTPQ5XKR4 325 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 TRIM40Q6P9F5 258 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 TTC5Q8N0Z6 440 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 SPATA4Q8NEY3 305 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 SMARCD2Q92925 531 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 TMEM59Q9BXS4 323 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 MFFQ9GZY8 342 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 LY9Q9HBG7 655 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 PDFQ9HBH1 243 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 NUP50Q9UKX7 468 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 CSDC2Q9Y534 153 aaKnown RBP3.8□□□□□ -1.8
PRKDC-208ENST00000536710 THSD7BQ9C0I4 1608 aa3.8□□□□□ -1.8
PRKDC-208ENST00000536710 KIR2DL5BA0A0G2JN68 375 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 KIR2DL5BA0A0G2JPC4 375 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 PSMB11A5LHX3 300 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 ICAM2P13598 275 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 TCN1P20061 433 aaPredicted RBP3.79□□□□□ -1.8
PRKDC-208ENST00000536710 HTR1EP28566 365 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 YAP1P46937 504 aaKnown RBP3.79□□□□□ -1.8
PRKDC-208ENST00000536710 SRSF5Q13243 272 aaKnown RBP3.79□□□□□ -1.8
PRKDC-208ENST00000536710 PRAMEF20Q5VT98 475 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 CNIH2Q6PI25 160 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 MFSD6LQ8IWD5 586 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 PIANPQ8IYJ0 282 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 KIR2DL5AQ8N109 375 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 DCAF4L2Q8NA75 395 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 C20orf203Q8NBC4 194 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 KIR2DL5BQ8NHK3 375 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 RAB3IL1Q8TBN0 382 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 ACOT11Q8WXI4 607 aaPredicted RBP3.79□□□□□ -1.8
PRKDC-208ENST00000536710 FRAT1Q92837 279 aaPredicted RBP3.79□□□□□ -1.8
PRKDC-208ENST00000536710 MBOAT4Q96T53 435 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 RASL11BQ9BPW5 248 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 ANP32EQ9BTT0 268 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 FAIM2Q9BWQ8 316 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 ZNF256Q9Y2P7 627 aaPredicted RBP3.79□□□□□ -1.8
PRKDC-208ENST00000536710 STARD10Q9Y365 291 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 SLC25A15Q9Y619 301 aa3.79□□□□□ -1.8
PRKDC-208ENST00000536710 A0A0G2JLM5 398 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 SMCO3A2RU48 225 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 C12orf71A8MTZ7 269 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 KLLNB2CW77 178 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 C12orf77C9JDV5 145 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 CCL21O00585 134 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 DYNC1I1O14576 645 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 SOX15O60248 233 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 MGRN1O60291 552 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 TNFSF13O75888 250 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 FGF1P05230 155 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 C2P06681 752 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 BTCP35070 178 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 VHLP40337 213 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 CCNA1P78396 465 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 TGM3Q08188 693 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 IL17AQ16552 155 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 CCDC14Q49A88 953 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 VPS26BQ4G0F5 336 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 XKR7Q5GH72 579 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 CARD17Q5XLA6 110 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 RFLNAQ6ZTI6 216 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 RALGPS2Q86X27 583 aaPredicted RBP3.78□□□□□ -1.8
PRKDC-208ENST00000536710 TMEM61Q8N0U2 210 aa3.78□□□□□ -1.8
PRKDC-208ENST00000536710 FCRL1Q96LA6 429 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms