RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 CHRM4P08173 479 aa15.03■□□□□ -0
PKP3-208ENST00000531857 CECR9P0C854 216 aa15.03■□□□□ -0
PKP3-208ENST00000531857 ITGA2P17301 1181 aa15.03■□□□□ -0
PKP3-208ENST00000531857 CALCRP30988 508 aa15.03■□□□□ -0
PKP3-208ENST00000531857 SELENOPP49908 381 aa15.03■□□□□ -0
PKP3-208ENST00000531857 PPOXP50336 477 aa15.03■□□□□ -0
PKP3-208ENST00000531857 NAAAQ02083 359 aa15.03■□□□□ -0
PKP3-208ENST00000531857 TRAP1Q12931 704 aaKnown RBP15.03■□□□□ -0
PKP3-208ENST00000531857 EFNB3Q15768 340 aa15.03■□□□□ -0
PKP3-208ENST00000531857 ZSWIM7Q19AV6 140 aa15.03■□□□□ -0
PKP3-208ENST00000531857 SAMD4BQ5PRF9 694 aaKnown RBP15.03■□□□□ -0
PKP3-208ENST00000531857 ANKRD16Q6P6B7 361 aa15.03■□□□□ -0
PKP3-208ENST00000531857 ARPINQ7Z6K5 226 aa15.03■□□□□ -0
PKP3-208ENST00000531857 GPAT4Q86UL3 456 aa15.03■□□□□ -0
PKP3-208ENST00000531857 RFLNBQ8N5W9 214 aa15.03■□□□□ -0
PKP3-208ENST00000531857 ZNF540Q8NDQ6 660 aa15.03■□□□□ -0
PKP3-208ENST00000531857 BCL2L2Q92843 193 aaPredicted RBP15.03■□□□□ -0
PKP3-208ENST00000531857 ZBTB18Q99592 522 aa15.03■□□□□ -0
PKP3-208ENST00000531857 SLC35A5Q9BS91 424 aa15.03■□□□□ -0
PKP3-208ENST00000531857 SF3B5Q9BWJ5 86 aaKnown RBP15.03■□□□□ -0
PKP3-208ENST00000531857 DPY30Q9C005 99 aa15.03■□□□□ -0
PKP3-208ENST00000531857 ADAM19Q9H013 955 aa15.03■□□□□ -0
PKP3-208ENST00000531857 SLC38A1Q9H2H9 487 aa15.03■□□□□ -0
PKP3-208ENST00000531857 VCX3BQ9H321 246 aa15.03■□□□□ -0
PKP3-208ENST00000531857 MUC13Q9H3R2 512 aa15.03■□□□□ -0
PKP3-208ENST00000531857 OBP2BQ9NPH6 170 aa15.03■□□□□ -0
PKP3-208ENST00000531857 GPR45Q9Y5Y3 372 aa15.03■□□□□ -0
PKP3-208ENST00000531857 A0A096LPE4 126 aa15.02■□□□□ -0
PKP3-208ENST00000531857 A0A1W2PPZ6 126 aa15.02■□□□□ -0
PKP3-208ENST00000531857 AQP7P3A6NL99 342 aa15.02■□□□□ -0
PKP3-208ENST00000531857 FAAHO00519 579 aa15.02■□□□□ -0
PKP3-208ENST00000531857 LILRA1O75019 489 aa15.02■□□□□ -0
PKP3-208ENST00000531857 SLC22A3O75751 556 aa15.02■□□□□ -0
PKP3-208ENST00000531857 KRT33AO76009 404 aa15.02■□□□□ -0
PKP3-208ENST00000531857 PDE5AO76074 875 aa15.02■□□□□ -0
PKP3-208ENST00000531857 GPIP06744 558 aa15.02■□□□□ -0
PKP3-208ENST00000531857 DAOP14920 347 aa15.02■□□□□ -0
PKP3-208ENST00000531857 GIFP27352 417 aa15.02■□□□□ -0
PKP3-208ENST00000531857 CHI3L1P36222 383 aaPredicted RBP15.02■□□□□ -0
PKP3-208ENST00000531857 IDH3GP51553 393 aaPredicted RBP15.02■□□□□ -0
PKP3-208ENST00000531857 P2RY4P51582 365 aa15.02■□□□□ -0
PKP3-208ENST00000531857 HPCAP84074 193 aa15.02■□□□□ -0
PKP3-208ENST00000531857 EPS8Q12929 822 aa15.02■□□□□ -0
PKP3-208ENST00000531857 BNIP2Q12982 314 aa15.02■□□□□ -0
PKP3-208ENST00000531857 KPNB1Q14974 876 aaKnown RBP15.02■□□□□ -0
PKP3-208ENST00000531857 MRPL2Q5T653 305 aaKnown RBP15.02■□□□□ -0
PKP3-208ENST00000531857 BLOC1S3Q6QNY0 202 aa15.02■□□□□ -0
PKP3-208ENST00000531857 MYPOPQ86VE0 399 aaPredicted RBP15.02■□□□□ -0
PKP3-208ENST00000531857 RNF130Q86XS8 419 aa15.02■□□□□ -0
PKP3-208ENST00000531857 CMIPQ8IY22 773 aa15.02■□□□□ -0
PKP3-208ENST00000531857 POP5Q969H6 163 aaKnown RBP15.02■□□□□ -0
PKP3-208ENST00000531857 RCN3Q96D15 328 aa15.02■□□□□ -0
PKP3-208ENST00000531857 ALKBH3Q96Q83 286 aaPredicted RBP15.02■□□□□ -0
PKP3-208ENST00000531857 NELFAQ9H3P2 528 aa15.02■□□□□ -0
PKP3-208ENST00000531857 SPAG4Q9NPE6 437 aa15.02■□□□□ -0
PKP3-208ENST00000531857 ADPRHL2Q9NX46 363 aa15.02■□□□□ -0
PKP3-208ENST00000531857 CCDC167Q9P0B6 97 aa15.02■□□□□ -0
PKP3-208ENST00000531857 CRNNQ9UBG3 495 aaPredicted RBP15.02■□□□□ -0
PKP3-208ENST00000531857 TMEFF2Q9UIK5 374 aaPredicted RBP15.02■□□□□ -0
PKP3-208ENST00000531857 ZNF587BE7ETH6 402 aa15.01□□□□□ -0.01
PKP3-208ENST00000531857 MRASO14807 208 aa15.01□□□□□ -0.01
PKP3-208ENST00000531857 UPK3AO75631 287 aa15.01□□□□□ -0.01
PKP3-208ENST00000531857 CELA3BP08861 270 aa15.01□□□□□ -0.01
PKP3-208ENST00000531857 TACSTD2P09758 323 aa15.01□□□□□ -0.01
PKP3-208ENST00000531857 RPS4Y1P22090 263 aaKnown RBP15.01□□□□□ -0.01
PKP3-208ENST00000531857 APEX1P27695 318 aaKnown RBP15.01□□□□□ -0.01
PKP3-208ENST00000531857 MAP2K6P52564 334 aa15.01□□□□□ -0.01
PKP3-208ENST00000531857 UBE2NP61088 152 aaKnown RBP15.01□□□□□ -0.01
PKP3-208ENST00000531857 PSME3P61289 254 aa15.01□□□□□ -0.01
PKP3-208ENST00000531857 HGFACQ04756 655 aa15.01□□□□□ -0.01
PKP3-208ENST00000531857 SLC34A1Q06495 639 aa15.01□□□□□ -0.01
PKP3-208ENST00000531857 SPANXN4Q5MJ08 99 aa15.01□□□□□ -0.01
PKP3-208ENST00000531857 ANXA8L1Q5VT79 327 aa15.01□□□□□ -0.01
PKP3-208ENST00000531857 TMEM225Q6GV28 225 aa15.01□□□□□ -0.01
PKP3-208ENST00000531857 CREB3L2Q70SY1 520 aa15.01□□□□□ -0.01
PKP3-208ENST00000531857 ABHD12BQ7Z5M8 362 aaPredicted RBP15.01□□□□□ -0.01
PKP3-208ENST00000531857 MEX3DQ86XN8 651 aaKnown RBP15.01□□□□□ -0.01
PKP3-208ENST00000531857 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.01□□□□□ -0.01
PKP3-208ENST00000531857 WDR60Q8WVS4 1066 aa15.01□□□□□ -0.01
PKP3-208ENST00000531857 TRNT1Q96Q11 434 aaKnown RBP15.01□□□□□ -0.01
PKP3-208ENST00000531857 SNX18Q96RF0 628 aa15.01□□□□□ -0.01
PKP3-208ENST00000531857 RAB1BQ9H0U4 201 aa15.01□□□□□ -0.01
PKP3-208ENST00000531857 RLIMQ9NVW2 624 aa15.01□□□□□ -0.01
PKP3-208ENST00000531857 LEF1Q9UJU2 399 aaPredicted RBP15.01□□□□□ -0.01
PKP3-208ENST00000531857 ARPC4-TTLL3A0A0A6YYG9 625 aa15□□□□□ -0.01
PKP3-208ENST00000531857 hCG_2039718K7EN88 272 aa15□□□□□ -0.01
PKP3-208ENST00000531857 ENTPD5O75356 428 aa15□□□□□ -0.01
PKP3-208ENST00000531857 IGLV1-44P01699 117 aa15□□□□□ -0.01
PKP3-208ENST00000531857 IGFBP1P08833 259 aaPredicted RBP15□□□□□ -0.01
PKP3-208ENST00000531857 ALDOCP09972 364 aaKnown RBP15□□□□□ -0.01
PKP3-208ENST00000531857 GKN3PP0CG01 181 aa15□□□□□ -0.01
PKP3-208ENST00000531857 IL7RP16871 459 aa15□□□□□ -0.01
PKP3-208ENST00000531857 CXCR1P25024 350 aa15□□□□□ -0.01
PKP3-208ENST00000531857 THBS4P35443 961 aa15□□□□□ -0.01
PKP3-208ENST00000531857 SRP14P37108 136 aaKnown RBP15□□□□□ -0.01
PKP3-208ENST00000531857 CHN2P52757 468 aa15□□□□□ -0.01
PKP3-208ENST00000531857 RUNX1T1Q06455 604 aa15□□□□□ -0.01
PKP3-208ENST00000531857 TRIP10Q15642 601 aa15□□□□□ -0.01
PKP3-208ENST00000531857 REP15Q6BDI9 236 aa15□□□□□ -0.01
PKP3-208ENST00000531857 EPHX4Q8IUS5 362 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms