RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 IGFBPL1Q8WX77 278 aa18.36■□□□□ 0.53
TRAPPC9-215ENST00000524162 LRR1Q96L50 414 aa18.36■□□□□ 0.53
TRAPPC9-215ENST00000524162 MOGAT1Q96PD6 335 aa18.36■□□□□ 0.53
TRAPPC9-215ENST00000524162 SEC14L4Q9UDX3 406 aa18.36■□□□□ 0.53
TRAPPC9-215ENST00000524162 RIMS3Q9UJD0 308 aa18.36■□□□□ 0.53
TRAPPC9-215ENST00000524162 ZNF229Q9UJW7 825 aa18.36■□□□□ 0.53
TRAPPC9-215ENST00000524162 ITGB1BP2Q9UKP3 347 aa18.36■□□□□ 0.53
TRAPPC9-215ENST00000524162 RNF115Q9Y4L5 304 aa18.36■□□□□ 0.53
TRAPPC9-215ENST00000524162 ZNF587BE7ETH6 402 aa18.35■□□□□ 0.53
TRAPPC9-215ENST00000524162 CXCR6O00574 342 aa18.35■□□□□ 0.53
TRAPPC9-215ENST00000524162 PLPP3O14495 311 aa18.35■□□□□ 0.53
TRAPPC9-215ENST00000524162 CD3EP07766 207 aa18.35■□□□□ 0.53
TRAPPC9-215ENST00000524162 NQO1P15559 274 aaKnown RBP18.35■□□□□ 0.53
TRAPPC9-215ENST00000524162 IFNA8P32881 189 aa18.35■□□□□ 0.53
TRAPPC9-215ENST00000524162 SELENOPP49908 381 aa18.35■□□□□ 0.53
TRAPPC9-215ENST00000524162 TAS2R41P59536 307 aa18.35■□□□□ 0.53
TRAPPC9-215ENST00000524162 PMS2P3Q13401 168 aa18.35■□□□□ 0.53
TRAPPC9-215ENST00000524162 FXNQ16595 210 aa18.35■□□□□ 0.53
TRAPPC9-215ENST00000524162 NIPAL3Q6P499 406 aa18.35■□□□□ 0.53
TRAPPC9-215ENST00000524162 CBLL1Q75N03 491 aa18.35■□□□□ 0.53
TRAPPC9-215ENST00000524162 P3H2Q8IVL5 708 aa18.35■□□□□ 0.53
TRAPPC9-215ENST00000524162 UEVLDQ8IX04 471 aa18.35■□□□□ 0.53
TRAPPC9-215ENST00000524162 LRRC75A-AS1Q8N1F1 130 aa18.35■□□□□ 0.53
TRAPPC9-215ENST00000524162 PIK3C3Q8NEB9 887 aa18.35■□□□□ 0.53
TRAPPC9-215ENST00000524162 MGAT4BQ9UQ53 548 aa18.35■□□□□ 0.53
TRAPPC9-215ENST00000524162 ACANP16112 2415 aa18.35■□□□□ 0.53
TRAPPC9-215ENST00000524162 HS3ST1O14792 307 aa18.34■□□□□ 0.53
TRAPPC9-215ENST00000524162 SLC43A1O75387 559 aa18.34■□□□□ 0.53
TRAPPC9-215ENST00000524162 MT-ND1P03886 318 aa18.34■□□□□ 0.53
TRAPPC9-215ENST00000524162 ASAH2BP0C7U1 165 aa18.34■□□□□ 0.53
TRAPPC9-215ENST00000524162 PTAFRP25105 342 aa18.34■□□□□ 0.53
TRAPPC9-215ENST00000524162 CLDN17P56750 224 aa18.34■□□□□ 0.53
TRAPPC9-215ENST00000524162 STK11Q15831 433 aa18.34■□□□□ 0.53
TRAPPC9-215ENST00000524162 KLHL17Q6TDP4 642 aa18.34■□□□□ 0.53
TRAPPC9-215ENST00000524162 TMEM108Q6UXF1 575 aa18.34■□□□□ 0.53
TRAPPC9-215ENST00000524162 TMEM123Q8N131 208 aa18.34■□□□□ 0.53
TRAPPC9-215ENST00000524162 KDM8Q8N371 416 aa18.34■□□□□ 0.53
TRAPPC9-215ENST00000524162 GEMIN6Q8WXD5 167 aaKnown RBP18.34■□□□□ 0.53
TRAPPC9-215ENST00000524162 PRRC1Q96M27 445 aa18.34■□□□□ 0.53
TRAPPC9-215ENST00000524162 KCTD14Q9BQ13 255 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC9-215ENST00000524162 NANSQ9NR45 359 aa18.34■□□□□ 0.53
TRAPPC9-215ENST00000524162 SLC17A5Q9NRA2 495 aa18.34■□□□□ 0.53
TRAPPC9-215ENST00000524162 NDE1Q9NXR1 346 aa18.34■□□□□ 0.53
TRAPPC9-215ENST00000524162 FAM53CQ9NYF3 392 aa18.34■□□□□ 0.53
TRAPPC9-215ENST00000524162 USF3Q68DE3 2245 aa18.34■□□□□ 0.53
TRAPPC9-215ENST00000524162 DPRXA6NFQ7 191 aa18.33■□□□□ 0.52
TRAPPC9-215ENST00000524162 GSTA4O15217 222 aa18.33■□□□□ 0.52
TRAPPC9-215ENST00000524162 KRT33AO76009 404 aa18.33■□□□□ 0.52
TRAPPC9-215ENST00000524162 FAM107AO95990 144 aa18.33■□□□□ 0.52
TRAPPC9-215ENST00000524162 HPRP00739 348 aa18.33■□□□□ 0.52
TRAPPC9-215ENST00000524162 PAX1P15863 534 aa18.33■□□□□ 0.52
TRAPPC9-215ENST00000524162 MNAT1P51948 309 aa18.33■□□□□ 0.52
TRAPPC9-215ENST00000524162 FOXG1P55316 489 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC9-215ENST00000524162 BSPH1Q075Z2 132 aa18.33■□□□□ 0.52
TRAPPC9-215ENST00000524162 ST3GAL3Q11203 375 aa18.33■□□□□ 0.52
TRAPPC9-215ENST00000524162 LSRQ86X29 649 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC9-215ENST00000524162 FAM169BQ8N8A8 192 aa18.33■□□□□ 0.52
TRAPPC9-215ENST00000524162 TPD52L3Q96J77 140 aa18.33■□□□□ 0.52
TRAPPC9-215ENST00000524162 ADAD1Q96M93 576 aaKnown RBP18.33■□□□□ 0.52
TRAPPC9-215ENST00000524162 OR2M2Q96R28 347 aa18.33■□□□□ 0.52
TRAPPC9-215ENST00000524162 CCT8L2Q96SF2 557 aa18.33■□□□□ 0.52
TRAPPC9-215ENST00000524162 MEPEQ9NQ76 525 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC9-215ENST00000524162 TAGLN3Q9UI15 199 aa18.33■□□□□ 0.52
TRAPPC9-215ENST00000524162 WNT11O96014 354 aa18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 IFNW1P05000 195 aa18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 HSD17B1P14061 328 aa18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 HOXC12P31275 282 aa18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 OR1E2P47887 323 aa18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 PRPS1P60891 318 aa18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 PIN1Q13526 163 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 C3orf36Q3SXR2 165 aa18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 DEF8Q6ZN54 512 aa18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 OFCC1Q8IZS5 231 aa18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 PGAM4Q8N0Y7 254 aa18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 C10orf53Q8N6V4 93 aa18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 WDR31Q8NA23 367 aa18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 TMEM239Q8WW34 195 aa18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 GRIP2Q9C0E4 1043 aa18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 UBTD1Q9HAC8 227 aa18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 NPAP1Q9NZP6 1156 aa18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 RPS6KA6Q9UK32 745 aa18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 A4GNTQ9UNA3 340 aa18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 VPS13CQ709C8 3753 aa18.32■□□□□ 0.52
TRAPPC9-215ENST00000524162 ARPC4-TTLL3A0A0A6YYG9 625 aa18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 SHOX2O60902 331 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 UPK3AO75631 287 aa18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 CH25HO95992 272 aa18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 TSPAN19P0C672 248 aa18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 TNFRSF1BP20333 461 aa18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 POU3F1Q03052 451 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 KRT72Q14CN4 511 aa18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 IFI44LQ53G44 452 aa18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 GKAP1Q5VSY0 366 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 HMBOX1Q6NT76 420 aa18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 ANKRD16Q6P6B7 361 aa18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 ZNF627Q7L945 461 aa18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 CCDC36Q8IYA8 594 aa18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 GPR137CQ8N3F9 429 aa18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 OR1K1Q8NGR3 316 aa18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 LILRB1Q8NHL6 650 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms