RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 ERVK-11Q9UQG0 969 aa1.67□□□□□ -2.14
CCNC-208ENST00000519617 SLC35A3Q9Y2D2 325 aa1.67□□□□□ -2.14
CCNC-208ENST00000519617 SLC9A8Q9Y2E8 581 aa1.67□□□□□ -2.14
CCNC-208ENST00000519617 KLHL20Q9Y2M5 609 aa1.67□□□□□ -2.14
CCNC-208ENST00000519617 KLF13Q9Y2Y9 288 aaPredicted RBP1.67□□□□□ -2.14
CCNC-208ENST00000519617 YARS2Q9Y2Z4 477 aaKnown RBP1.67□□□□□ -2.14
CCNC-208ENST00000519617 ATG4BQ9Y4P1 393 aa1.67□□□□□ -2.14
CCNC-208ENST00000519617 ASB4Q9Y574 426 aa1.67□□□□□ -2.14
CCNC-208ENST00000519617 SPIN1Q9Y657 262 aaPredicted RBP1.67□□□□□ -2.14
CCNC-208ENST00000519617 GMEB1Q9Y692 573 aa1.67□□□□□ -2.14
CCNC-208ENST00000519617 U3KQA8 63 aa1.67□□□□□ -2.14
CCNC-208ENST00000519617 GPR179Q6PRD1 2367 aa1.67□□□□□ -2.14
CCNC-208ENST00000519617 ADAMTS9Q9P2N4 1935 aa1.67□□□□□ -2.14
CCNC-208ENST00000519617 MUC3AQ02505 3323 aa1.67□□□□□ -2.14
CCNC-208ENST00000519617 ASXL3Q9C0F0 2248 aa1.67□□□□□ -2.14
CCNC-208ENST00000519617 WDR87Q6ZQQ6 2873 aa1.67□□□□□ -2.14
CCNC-208ENST00000519617 SEC16AO15027 2179 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 BPTFQ12830 3046 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 A0A087WZY1 265 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 IGKV3D-11A0A0A0MRZ8 115 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 IGHV1-45A0A0A0MS14 117 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 A0A0G2JN53 185 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 TRBV11-1A0A0K0K1C0 115 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 A0A1W2PQ72 361 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 ELOVL7A1L3X0 281 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 FAM149AA5PLN7 773 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 ZNF860A6NHJ4 632 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 FAM90A20PA6NIJ5 464 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 OR6C70A6NIJ9 312 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 GLOD5A6NK44 160 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 AQP12BA6NM10 295 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 SNTNA6NMZ2 147 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 WASHC1A8K0Z3 465 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 A8MUI8 341 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 FAM220BPB1ANY3 271 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 BLOC1S5-TXNDC5H3BN57 136 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 UPK1AO00322 258 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 RTCAO00442 366 aaKnown RBP1.66□□□□□ -2.14
CCNC-208ENST00000519617 GNGT2O14610 69 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 AP3D1O14617 1153 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 ZNF195O14628 629 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 PGRMC2O15173 223 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 TO15178 435 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 P2RX6O15547 441 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 HCRTR1O43613 425 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 EIF4E2O60573 245 aaKnown RBP1.66□□□□□ -2.14
CCNC-208ENST00000519617 NDUFS7O75251 213 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 FKBP6O75344 327 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 SH3BGRLO75368 114 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 REM1O75628 298 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 SLC25A12O75746 678 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 CDC123O75794 336 aaPredicted RBP1.66□□□□□ -2.14
CCNC-208ENST00000519617 CBR3O75828 277 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 LRATO95237 230 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 NUDT14O95848 222 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 C6orf47O95873 294 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 GBAP04062 536 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 HIST1H2ABP04908 130 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 IFNW1P05000 195 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 HMGN2P05204 90 aaKnown RBP1.66□□□□□ -2.14
CCNC-208ENST00000519617 GPIP06744 558 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 ABCB1P08183 1280 aaPredicted RBP1.66□□□□□ -2.14
CCNC-208ENST00000519617 PABPC4LP0CB38 370 aaKnown RBP1.66□□□□□ -2.14
CCNC-208ENST00000519617 PNMTP11086 282 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 LAMP1P11279 417 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 UBL4AP11441 157 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 NR2C1P13056 603 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 COX4I1P13073 169 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 HSD17B1P14061 328 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 LIFP15018 202 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 ETS2P15036 469 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 GPX2P18283 190 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 CDH2P19022 906 aaPredicted RBP1.66□□□□□ -2.14
CCNC-208ENST00000519617 PGCP20142 388 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 MAOAP21397 527 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 HTR1EP28566 365 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 GTF2E2P29084 291 aaKnown RBP1.66□□□□□ -2.14
CCNC-208ENST00000519617 RRM2P31350 389 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 GABRA3P34903 492 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 PGM1P36871 562 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 PIGAP37287 484 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 FEN1P39748 380 aaKnown RBP1.66□□□□□ -2.14
CCNC-208ENST00000519617 FRKP42685 505 aaPredicted RBP1.66□□□□□ -2.14
CCNC-208ENST00000519617 HTR3AP46098 478 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 GABRA4P48169 554 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 GPR143P51810 404 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 ZNF41P51814 821 aaPredicted RBP1.66□□□□□ -2.14
CCNC-208ENST00000519617 PDX1P52945 283 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 NME5P56597 212 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 NUP107P57740 925 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 PSME3P61289 254 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 UFM1P61960 85 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 KCNJ2P63252 427 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 HBA1P69905 142 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 OLR1P78380 273 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 CDK6Q00534 326 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 OC90Q02509 493 aaPredicted RBP1.66□□□□□ -2.14
CCNC-208ENST00000519617 CHRNB3Q05901 458 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 C17orf67Q0P5P2 114 aa1.66□□□□□ -2.14
CCNC-208ENST00000519617 FUT7Q11130 342 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms