RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 CDC42EP2O14613 210 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 PPP1R3DO95685 299 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 IFNA7P01567 189 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 IFNW1P05000 195 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 H1F0P07305 194 aaKnown RBP6.76□□□□□ -1.33
CLIP1-205ENST00000514271 OR10A3P58181 314 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 FLI1Q01543 452 aaPredicted RBP6.76□□□□□ -1.33
CLIP1-205ENST00000514271 CRYZQ08257 329 aaKnown RBP6.76□□□□□ -1.33
CLIP1-205ENST00000514271 COTL1Q14019 142 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 IL11RAQ14626 422 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 PYDC2Q56P42 97 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 BCL2L15Q5TBC7 163 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 LCTLQ6UWM7 567 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 ZNF621Q6ZSS3 439 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 OVCH1Q7RTY7 1134 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 AGBL5Q8NDL9 886 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 C17orf47Q8NEP4 570 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 OR5T2Q8NGG2 359 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 OR6T1Q8NGN1 323 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 IL4I1Q96RQ9 567 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 HCAR1Q9BXC0 346 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 PRRG3Q9BZD7 231 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 ACTR6Q9GZN1 396 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 SRMSQ9H3Y6 488 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 EGLN3Q9H6Z9 239 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 DDX28Q9NUL7 540 aaKnown RBP6.76□□□□□ -1.33
CLIP1-205ENST00000514271 ANAPC10Q9UM13 185 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 SPATA2Q9UM82 520 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 ASF1AQ9Y294 204 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 A0A0J9YY10 115 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 ZNF98A6NK75 572 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 A8MUA0 341 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 SDC3O75056 442 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 LDB3O75112 727 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 NTN1O95631 604 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 IFNGR1P15260 489 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 GSTM3P21266 225 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 AK4P27144 223 aaPredicted RBP6.75□□□□□ -1.33
CLIP1-205ENST00000514271 CMPK1P30085 196 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 LSSP48449 732 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 CCR9P51686 369 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 TRA2BP62995 288 aaKnown RBP6.75□□□□□ -1.33
CLIP1-205ENST00000514271 DGCR2P98153 550 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 C1orf61Q13536 156 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 TRAM1Q15629 374 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 GSG1LQ6UXU4 331 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 BEND4Q6ZU67 534 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 SHFQ7M4L6 423 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 KRT74Q7RTS7 529 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 LNX2Q8N448 690 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 SLC2A12Q8TD20 617 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 ZNF480Q8WV37 535 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 LCN9Q8WX39 176 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 OR5P2Q8WZ92 322 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 PINK1Q9BXM7 581 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 PELI2Q9HAT8 420 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 BRD7Q9NPI1 651 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 TMEM82A0PJX8 343 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 DBX1A6NMT0 343 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 PSMD9O00233 223 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 FZD7O75084 574 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 ITGA10O75578 1167 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 HLA-DPB1P04440 258 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 HMGN1P05114 100 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 RAB3AP20336 220 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 SKP1P63208 163 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 GANABQ14697 944 aaKnown RBP6.75□□□□□ -1.33
CLIP1-205ENST00000514271 MAPK14Q16539 360 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 MST1LQ2TV78 715 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 FAM69AQ5T7M9 428 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 GUSBP11Q6P575 273 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 LAPTM4BQ86VI4 370 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 SPRYD4Q8WW59 207 aaPredicted RBP6.75□□□□□ -1.33
CLIP1-205ENST00000514271 SMPDL3BQ92485 455 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 NSMAFQ92636 917 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 UBE2E3Q969T4 207 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 CMKLR1Q99788 373 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 USB1Q9BQ65 265 aaKnown RBP6.75□□□□□ -1.33
CLIP1-205ENST00000514271 C1QTNF6Q9BXI9 259 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 MS4A8Q9BY19 250 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 SLC38A1Q9H2H9 487 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 HRASLSQ9HDD0 168 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 IFT46Q9NQC8 304 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 PRDM9Q9NQV7 894 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 RHCGQ9UBD6 479 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 RPS6KB2Q9UBS0 482 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 SPIN1Q9Y657 262 aaPredicted RBP6.75□□□□□ -1.33
CLIP1-205ENST00000514271 ANKDD1BA6NHY2 528 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 L7N2F9 121 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 NDUFB6O95139 128 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 ANXA4P09525 319 aaPredicted RBP6.75□□□□□ -1.33
CLIP1-205ENST00000514271 RPL3P39023 403 aaKnown RBP6.75□□□□□ -1.33
CLIP1-205ENST00000514271 RPS15P62841 145 aaKnown RBP6.75□□□□□ -1.33
CLIP1-205ENST00000514271 INSM1Q01101 510 aaPredicted RBP6.75□□□□□ -1.33
CLIP1-205ENST00000514271 DBPQ10586 325 aaPredicted RBP6.75□□□□□ -1.33
CLIP1-205ENST00000514271 HABP2Q14520 560 aaPredicted RBP6.75□□□□□ -1.33
CLIP1-205ENST00000514271 OPCMLQ14982 345 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 CDK5R1Q15078 307 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 TMEM44Q2T9K0 475 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 HIST2H2AA3Q6FI13 130 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms