RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 KLF13Q9Y2Y9 288 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 FAM215AQ9Y5M1 114 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 DNAJC13O75165 2243 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 IGKV1D-42A0A075B6H8 117 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 A0A1W2PPR1 153 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 TUBAL3A6NHL2 446 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 KLRC4-KLRK1H3BQV0 150 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 ZNF701M0R085 212 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 M0R3G1 203 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 HCN1O60741 890 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 ZNF354AO60765 605 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 NPIPB7O75200 414 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 NTN1O95631 604 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 POU2F1P14859 743 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 ELK4P28324 431 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 ADH6P28332 368 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 GRK5P34947 590 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 PCYT1AP49585 367 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 IL1RL1Q01638 556 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 TMED1Q13445 227 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 FHL1Q13642 323 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 SLC30A6Q6NXT4 461 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 CBLN3Q6UW01 205 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 CASP12Q6UXS9 341 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 GRINAQ7Z429 371 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 RPS19BP1Q86WX3 136 aaKnown RBP9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 ALDH16A1Q8IZ83 802 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 LNX2Q8N448 690 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 B4GALNT2Q8NHY0 566 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 STK35Q8TDR2 534 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 GPR119Q8TDV5 335 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 PAQR8Q8TEZ7 354 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 TMEM234Q8WY98 164 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 FAM46AQ96IP4 442 aaKnown RBP9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 VCX3AQ9NNX9 186 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 CTPS2Q9NRF8 586 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 PSORS1C1Q9UIG5 152 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 CARD8Q9Y2G2 431 aa9.4□□□□□ -0.9
PDLIM5-217ENST00000512274 EML6Q6ZMW3 1958 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 HRNRQ86YZ3 2850 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 DPPA5A6NC42 116 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 EFCAB10A6NFE3 127 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 UNC119BA6NIH7 251 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 FIGNL2A6NMB9 653 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 SNTNA6NMZ2 147 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 CLCA1A8K7I4 914 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 FAM166BA8MTA8 275 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 H3BN98 237 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 BHLHE40O14503 412 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 CDC42EP2O14613 210 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 ARPC3O15145 178 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 PHF1O43189 567 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 OIP5O43482 229 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 HCRTR2O43614 444 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 IDH3BO43837 385 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 OR2J2O76002 312 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 MT-ATP6P00846 226 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 HTR1AP08908 422 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 EPXP11678 715 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 IFI30P13284 250 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 BMP7P18075 431 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 PEX19P40855 299 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 PTGDSP41222 190 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 PRPS1P60891 318 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 LSM11P83369 360 aaKnown RBP eCLIP9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 GINS1Q14691 196 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 RTL4Q6ZR62 310 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 CCDC103Q8IW40 242 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 PRR22Q8IZ63 422 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 FADS6Q8N9I5 356 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 RELL2Q8NC24 303 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 OR2T33Q8NG76 320 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 CNIH3Q8TBE1 160 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 TMEM163Q8TC26 289 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 SGTBQ96EQ0 304 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 PERPQ96FX8 193 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 SLC38A2Q96QD8 506 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 NODALQ96S42 347 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 RTN4RQ9BZR6 473 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 RBM38Q9H0Z9 239 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 C20orf141Q9NUB4 165 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 CLN6Q9NWW5 311 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 CNIH4Q9P003 139 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 ZNF337Q9Y3M9 751 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 WIF1Q9Y5W5 379 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 LIPGQ9Y5X9 500 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 CHCHD2Q9Y6H1 151 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 HEATR5AQ86XA9 2040 aa9.39□□□□□ -0.91
PDLIM5-217ENST00000512274 NBEAL1Q6ZS30 2694 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 A0A087WZY1 265 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 IRGMA1A4Y4 181 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 EFCAB9A8MZ26 197 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 KDM4EB2RXH2 506 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 WWP2O00308 870 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 IMPA2O14732 288 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 PRODHO43272 600 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 ZNF208O43345 1280 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 ITGA10O75578 1167 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 ASAH2BP0C7U1 165 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms