RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 MAPK11Q15759 364 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 TSTQ16762 297 aaKnown RBP8.59□□□□□ -1.03
NEK1-203ENST00000507142 MPEG1Q2M385 716 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 OR7E24Q6IFN5 339 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 ZNF704Q6ZNC4 412 aaPredicted RBP8.59□□□□□ -1.03
NEK1-203ENST00000507142 BEND4Q6ZU67 534 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 RETREG3Q86VR2 466 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 PDSS2Q86YH6 399 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 LINC00346Q8IVM7 164 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 OR2L13Q8N349 312 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 OR5T2Q8NGG2 359 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 SYT4Q9H2B2 425 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 SNTG1Q9NSN8 517 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 ACER3Q9NUN7 267 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 NTNG1Q9Y2I2 539 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 HS3ST3B1Q9Y662 390 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 SPTA1P02549 2419 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 LCTP09848 1927 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 CNOT1A5YKK6 2376 aaKnown RBP8.59□□□□□ -1.03
NEK1-203ENST00000507142 AGAP5A6NIR3 686 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 FAM183AA6NL82 134 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 ZNF593O00488 134 aaPredicted RBP8.59□□□□□ -1.03
NEK1-203ENST00000507142 PIP5K1CO60331 668 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 ACTL6AO96019 429 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 ARR3P36575 388 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 ZFP36L2P47974 494 aaKnown RBP8.59□□□□□ -1.03
NEK1-203ENST00000507142 NR1H2P55055 460 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 SNRPD2P62316 118 aaKnown RBP8.59□□□□□ -1.03
NEK1-203ENST00000507142 ZNF846Q147U1 533 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 ZMAT1Q5H9K5 638 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 DHRS4L2Q6PKH6 230 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 RBMS3Q6XE24 437 aaKnown RBP8.59□□□□□ -1.03
NEK1-203ENST00000507142 KLBQ86Z14 1044 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 OR5AS1Q8N127 324 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 PFN4Q8NHR9 129 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 GPR119Q8TDV5 335 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 H1FXQ92522 213 aaKnown RBP8.59□□□□□ -1.03
NEK1-203ENST00000507142 DNTTIP1Q9H147 329 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 GORASP2Q9H8Y8 452 aa8.59□□□□□ -1.03
NEK1-203ENST00000507142 NDRG4Q9ULP0 352 aaKnown RBP8.59□□□□□ -1.03
NEK1-203ENST00000507142 TMEM269A0A1B0GVZ9 245 aa8.59□□□□□ -1.04
NEK1-203ENST00000507142 PLOD2O00469 737 aa8.59□□□□□ -1.04
NEK1-203ENST00000507142 CDX4O14627 284 aaPredicted RBP8.59□□□□□ -1.04
NEK1-203ENST00000507142 C4BPBP20851 252 aa8.59□□□□□ -1.04
NEK1-203ENST00000507142 F8A1P23610 371 aa8.59□□□□□ -1.04
NEK1-203ENST00000507142 HNRNPFP52597 415 aaKnown RBP8.59□□□□□ -1.04
NEK1-203ENST00000507142 IL18R1Q13478 541 aa8.59□□□□□ -1.04
NEK1-203ENST00000507142 LINGO2Q7L985 606 aa8.59□□□□□ -1.04
NEK1-203ENST00000507142 ZNF565Q8N9K5 539 aa8.59□□□□□ -1.04
NEK1-203ENST00000507142 ST7LQ8TDW4 575 aa8.59□□□□□ -1.04
NEK1-203ENST00000507142 COX4I2Q96KJ9 171 aa8.59□□□□□ -1.04
NEK1-203ENST00000507142 TUBA1CQ9BQE3 449 aa8.59□□□□□ -1.04
NEK1-203ENST00000507142 TTTY12Q9BZ98 90 aa8.59□□□□□ -1.04
NEK1-203ENST00000507142 EGLN3Q9H6Z9 239 aa8.59□□□□□ -1.04
NEK1-203ENST00000507142 KCNS2Q9ULS6 477 aa8.59□□□□□ -1.04
NEK1-203ENST00000507142 A0A1W2PR80 420 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 FBP2O00757 339 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 RLN1P04808 185 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 CSN2P05814 226 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 DIO1P49895 249 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 ZNF117Q03924 483 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 CNN3Q15417 329 aaKnown RBP8.58□□□□□ -1.04
NEK1-203ENST00000507142 PGGHGQ32M88 737 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 TP53I3Q53FA7 332 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 ANKRD16Q6P6B7 361 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 FAM131AQ6UXB0 335 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 PTPMT1Q8WUK0 201 aaPredicted RBP8.58□□□□□ -1.04
NEK1-203ENST00000507142 TRMT61AQ96FX7 289 aaKnown RBP8.58□□□□□ -1.04
NEK1-203ENST00000507142 NMNAT3Q96T66 252 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 SMURF1Q9HCE7 757 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 TNFRSF12AQ9NP84 129 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 SIDT1Q9NXL6 827 aaKnown RBP8.58□□□□□ -1.04
NEK1-203ENST00000507142 MED16Q9Y2X0 877 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 NEUROG3Q9Y4Z2 214 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 NKX2-2O95096 273 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 CD14P08571 375 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 DBHP09172 617 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 SBK3P0C264 359 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 OR8G3PP0DMU2 310 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 ZNF12P17014 697 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 RPL27P61353 136 aaKnown RBP8.58□□□□□ -1.04
NEK1-203ENST00000507142 TUBA3CQ13748 450 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 KEAP1Q14145 624 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 GK3PQ14409 553 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 TUBA3EQ6PEY2 450 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 TMEM99Q8N816 258 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 OR5AK2Q8NH90 309 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 KCTD7Q96MP8 289 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 LRFN5Q96NI6 719 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 PILRAQ9UKJ1 303 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 TMA7Q9Y2S6 64 aaKnown RBP8.58□□□□□ -1.04
NEK1-203ENST00000507142 SGCEO43556 437 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 ZNF432O94892 652 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 SNAP29O95721 258 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 GPX2P18283 190 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 GLP1RP43220 463 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 GNG2P59768 71 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 ST3GAL4Q11206 333 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 TSPAN31Q12999 210 aa8.58□□□□□ -1.04
NEK1-203ENST00000507142 MAD2L1BPQ15013 274 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms