RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 POLR2HP52434 150 aaKnown RBP11.84□□□□□ -0.51
GARNL3-220ENST00000496711 NR0B2Q15466 257 aa11.84□□□□□ -0.51
GARNL3-220ENST00000496711 ZNF684Q5T5D7 378 aa11.84□□□□□ -0.51
GARNL3-220ENST00000496711 SLC6A19Q695T7 634 aa11.84□□□□□ -0.51
GARNL3-220ENST00000496711 TRILQ7L0X0 811 aa11.84□□□□□ -0.51
GARNL3-220ENST00000496711 FAM220AQ7Z4H9 259 aa11.84□□□□□ -0.51
GARNL3-220ENST00000496711 UBE2J2Q8N2K1 259 aa11.84□□□□□ -0.51
GARNL3-220ENST00000496711 SCAIQ8N9R8 606 aa11.84□□□□□ -0.51
GARNL3-220ENST00000496711 ZNF511Q8NB15 262 aa11.84□□□□□ -0.51
GARNL3-220ENST00000496711 PHYHIPQ92561 330 aa11.84□□□□□ -0.51
GARNL3-220ENST00000496711 TSSK2Q96PF2 358 aa11.84□□□□□ -0.51
GARNL3-220ENST00000496711 KCNJ15Q99712 375 aa11.84□□□□□ -0.51
GARNL3-220ENST00000496711 PDCD1LG2Q9BQ51 273 aa11.84□□□□□ -0.51
GARNL3-220ENST00000496711 IER2Q9BTL4 223 aa11.84□□□□□ -0.51
GARNL3-220ENST00000496711 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.84□□□□□ -0.51
GARNL3-220ENST00000496711 A0A1W2PPC1 479 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 OR6C70A6NIJ9 312 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 PRR32B1ATL7 298 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 ZNF879B4DU55 563 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 H7C1C5 153 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 ATP6V1G1O75348 118 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 KRT8P05787 483 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 LCN6P62502 163 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 RNF4P78317 190 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 HSD17B12Q53GQ0 312 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 GUSBP11Q6P575 273 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 ZNF574Q6ZN55 896 aaPredicted RBP11.83□□□□□ -0.52
GARNL3-220ENST00000496711 OVCH1Q7RTY7 1134 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 MAMDC2Q7Z304 686 aaPredicted RBP11.83□□□□□ -0.52
GARNL3-220ENST00000496711 KANSL1Q7Z3B3 1105 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 TIGD4Q8IY51 512 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 OR6F1Q8NGZ6 308 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 FRMD6Q96NE9 622 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 ABRACLQ9P1F3 81 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 TMED7-TICAM2A0A0A6YYA0 188 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 IGHV3-20A0A0C4DH32 117 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 A0A1W2PPK0 400 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 TMEM72A0PK05 275 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 CPED1A4D0V7 1026 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 SUSD5O60279 629 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 PAHP00439 452 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 TACSTD2P09758 323 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 PITPNBP48739 271 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 FOXL2P58012 376 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 SQSTM1Q13501 440 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 KCNJ8Q15842 424 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 SGCBQ16585 318 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 YIF1BQ5BJH7 314 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 ZNF57Q68EA5 555 aaPredicted RBP11.83□□□□□ -0.52
GARNL3-220ENST00000496711 TSSK4Q6SA08 328 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 PLET1Q6UQ28 207 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 UNQ9370/PRO34162Q6UXP9 181 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 GRINAQ7Z429 371 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 KCTD20Q7Z5Y7 419 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 ANKRD37Q7Z713 158 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 CDC20BQ86Y33 519 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 HAVCR2Q8TDQ0 301 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 OR6C1Q96RD1 312 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 MNTQ99583 582 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 SMAD5Q99717 465 aaKnown RBP11.83□□□□□ -0.52
GARNL3-220ENST00000496711 PTDSS2Q9BVG9 487 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 SEMA4CQ9C0C4 833 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 ZCCHC4Q9H5U6 513 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 SRA1Q9HD15 236 aaKnown RBP11.83□□□□□ -0.52
GARNL3-220ENST00000496711 TAS2R10Q9NYW0 307 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 TEKT2Q9UIF3 430 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 ZNF346Q9UL40 294 aaKnown RBP11.83□□□□□ -0.52
GARNL3-220ENST00000496711 KLHDC2Q9Y2U9 406 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 ZNF281Q9Y2X9 895 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 TMED7Q9Y3B3 224 aa11.83□□□□□ -0.52
GARNL3-220ENST00000496711 USP34Q70CQ2 3546 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 ANKRD61A6NGH8 418 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 HMX3A6NHT5 357 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 IDSB3KWA1 339 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 PSMD9O00233 223 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 DCTN6O00399 190 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 HEXBP07686 556 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 OR8G3PP0DMU2 310 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 EPXP11678 715 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 PSKH1P11801 424 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 FOSL2P15408 326 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 ATF1P18846 271 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 DDOSTP39656 456 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 SLC26A5P58743 744 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 NANOS3P60323 173 aaKnown RBP11.82□□□□□ -0.52
GARNL3-220ENST00000496711 MRPL28Q13084 256 aaKnown RBP11.82□□□□□ -0.52
GARNL3-220ENST00000496711 EFR3AQ14156 821 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 NKAIN1Q4KMZ8 207 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 ATAD3CQ5T2N8 411 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 FAM69AQ5T7M9 428 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 EEF1A1P5Q5VTE0 462 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 C1QL3Q5VWW1 255 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 PYHIN1Q6K0P9 492 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 EGFL6Q8IUX8 553 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 MISPQ8IVT2 679 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 UBALD2Q8IYN6 164 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 DUSP18Q8NEJ0 188 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 GPR119Q8TDV5 335 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 RFT1Q96AA3 541 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 ADAD1Q96M93 576 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms