RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 ZNF620Q6ZNG0 422 aa3.82□□□□□ -1.8
SSR3-208ENST00000496050 RNF165Q6ZSG1 346 aa3.82□□□□□ -1.8
SSR3-208ENST00000496050 OR9G1Q8NH87 305 aa3.82□□□□□ -1.8
SSR3-208ENST00000496050 HSFY1Q96LI6 401 aa3.82□□□□□ -1.8
SSR3-208ENST00000496050 MS4A4EQ96PG1 132 aa3.82□□□□□ -1.8
SSR3-208ENST00000496050 SORT1Q99523 831 aa3.82□□□□□ -1.8
SSR3-208ENST00000496050 CENPKQ9BS16 269 aa3.82□□□□□ -1.8
SSR3-208ENST00000496050 EXD2Q9NVH0 621 aa3.82□□□□□ -1.8
SSR3-208ENST00000496050 NUP50Q9UKX7 468 aa3.82□□□□□ -1.8
SSR3-208ENST00000496050 MMP17Q9ULZ9 603 aa3.82□□□□□ -1.8
SSR3-208ENST00000496050 NEUROG3Q9Y4Z2 214 aa3.82□□□□□ -1.8
SSR3-208ENST00000496050 ATRXP46100 2492 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.81□□□□□ -1.8
SSR3-208ENST00000496050 A0A1W2PPV9 198 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 PSMB11A5LHX3 300 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 C12orf71A8MTZ7 269 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 E9PBE3 544 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 IGHV2-5P01817 119 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 SERPIND1P05546 499 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 C2P06681 752 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 CRYGBP07316 175 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 TOP1P11387 765 aaKnown RBP3.81□□□□□ -1.8
SSR3-208ENST00000496050 ZNF19P17023 458 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 FUT3P21217 361 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 NUP107P57740 925 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 FBXW4P57775 412 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 KCNJ2P63252 427 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 BEX3Q00994 111 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 RCN1Q15293 331 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 TGFBIQ15582 683 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 IL17AQ16552 155 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 PAGE3Q5JUK9 113 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 ARMC12Q5T9G4 340 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 METAP1DQ6UB28 335 aaPredicted RBP3.81□□□□□ -1.8
SSR3-208ENST00000496050 ZNF546Q86UE3 836 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 PIANPQ8IYJ0 282 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 BBS5Q8N3I7 341 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 DCAF4L2Q8NA75 395 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 SPATA4Q8NEY3 305 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 NEIL3Q8TAT5 605 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 FAM151AQ8WW52 585 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 SMARCD2Q92925 531 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 TMEM246Q9BRR3 403 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 NUP58Q9BVL2 599 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 SIAEQ9HAT2 523 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 PISDQ9UG56 409 aa3.81□□□□□ -1.8
SSR3-208ENST00000496050 MTRF1LQ9UGC7 380 aaKnown RBP3.81□□□□□ -1.8
SSR3-208ENST00000496050 ZNF256Q9Y2P7 627 aaPredicted RBP3.81□□□□□ -1.8
SSR3-208ENST00000496050 CSDC2Q9Y534 153 aaKnown RBP3.81□□□□□ -1.8
SSR3-208ENST00000496050 CHD4Q14839 1912 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 CDHR2Q9BYE9 1310 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 CCL21O00585 134 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 AGTP01019 485 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 ICAM2P13598 275 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 TCN1P20061 433 aaPredicted RBP3.8□□□□□ -1.8
SSR3-208ENST00000496050 CAV2P51636 162 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 VPS26BQ4G0F5 336 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 TTC5Q8N0Z6 440 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 OR2G2Q8NGZ5 317 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 RAB3IL1Q8TBN0 382 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 FANK1Q8TC84 345 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 GPR151Q8TDV0 419 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 FGF14Q92915 247 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 RPUSD4Q96CM3 377 aaKnown RBP3.8□□□□□ -1.8
SSR3-208ENST00000496050 FCRL1Q96LA6 429 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 OR8B4Q96RC9 309 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 MBOAT4Q96T53 435 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 SH3GL1Q99961 368 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 KCTD14Q9BQ13 255 aaPredicted RBP3.8□□□□□ -1.8
SSR3-208ENST00000496050 TMEM59Q9BXS4 323 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 FAM192AQ9GZU8 254 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 ILKAPQ9H0C8 392 aaPredicted RBP3.8□□□□□ -1.8
SSR3-208ENST00000496050 VPS37BQ9H9H4 285 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 NANOGQ9H9S0 305 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 ADAP2Q9NPF8 381 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 QPCTLQ9NXS2 382 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 CALYQ9NYX4 217 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 PSMC3IPQ9P2W1 217 aaPredicted RBP3.8□□□□□ -1.8
SSR3-208ENST00000496050 SLC25A15Q9Y619 301 aa3.8□□□□□ -1.8
SSR3-208ENST00000496050 SMCO3A2RU48 225 aa3.79□□□□□ -1.8
SSR3-208ENST00000496050 RBMY1BA6NDE4 496 aaKnown RBP3.79□□□□□ -1.8
SSR3-208ENST00000496050 RBMY1EA6NEQ0 496 aaKnown RBP3.79□□□□□ -1.8
SSR3-208ENST00000496050 C12orf77C9JDV5 145 aa3.79□□□□□ -1.8
SSR3-208ENST00000496050 SGK1O00141 431 aa3.79□□□□□ -1.8
SSR3-208ENST00000496050 SOX15O60248 233 aa3.79□□□□□ -1.8
SSR3-208ENST00000496050 GIPP09681 153 aaPredicted RBP3.79□□□□□ -1.8
SSR3-208ENST00000496050 RBMY1DP0C7P1 496 aaKnown RBP3.79□□□□□ -1.8
SSR3-208ENST00000496050 CHTF8P0CG12 524 aa3.79□□□□□ -1.8
SSR3-208ENST00000496050 RBMY1A1P0DJD3 496 aaKnown RBP3.79□□□□□ -1.8
SSR3-208ENST00000496050 ATP5C1P36542 298 aaKnown RBP3.79□□□□□ -1.8
SSR3-208ENST00000496050 UGT2B15P54855 530 aa3.79□□□□□ -1.8
SSR3-208ENST00000496050 WNT4P56705 351 aa3.79□□□□□ -1.8
SSR3-208ENST00000496050 GNB2P62879 340 aa3.79□□□□□ -1.8
SSR3-208ENST00000496050 ENPEPQ07075 957 aa3.79□□□□□ -1.8
SSR3-208ENST00000496050 HSP90AB3PQ58FF7 597 aa3.79□□□□□ -1.8
SSR3-208ENST00000496050 RAET1LQ5VY80 246 aa3.79□□□□□ -1.8
SSR3-208ENST00000496050 CARD17Q5XLA6 110 aa3.79□□□□□ -1.8
SSR3-208ENST00000496050 TRIM40Q6P9F5 258 aa3.79□□□□□ -1.8
SSR3-208ENST00000496050 C19orf35Q6ZS72 473 aa3.79□□□□□ -1.8
SSR3-208ENST00000496050 SLC25A48Q6ZT89 311 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms