RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 OTUD6BQ8N6M0 293 aa3.64□□□□□ -1.83
VPS26A-206ENST00000489794 OR10G9Q8NGN4 311 aa3.64□□□□□ -1.83
VPS26A-206ENST00000489794 SRSF12Q8WXF0 261 aaKnown RBP3.64□□□□□ -1.83
VPS26A-206ENST00000489794 UFD1Q92890 307 aa3.64□□□□□ -1.83
VPS26A-206ENST00000489794 FGF11Q92914 225 aa3.64□□□□□ -1.83
VPS26A-206ENST00000489794 CXorf40BQ96DE9 158 aa3.64□□□□□ -1.83
VPS26A-206ENST00000489794 ZNF285Q96NJ3 590 aa3.64□□□□□ -1.83
VPS26A-206ENST00000489794 RPRD1AQ96P16 312 aaPredicted RBP3.64□□□□□ -1.83
VPS26A-206ENST00000489794 RNF2Q99496 336 aa3.64□□□□□ -1.83
VPS26A-206ENST00000489794 SLC39A3Q9BRY0 314 aa3.64□□□□□ -1.83
VPS26A-206ENST00000489794 FAM192AQ9GZU8 254 aa3.64□□□□□ -1.83
VPS26A-206ENST00000489794 RAB18Q9NP72 206 aa3.64□□□□□ -1.83
VPS26A-206ENST00000489794 THUMPD1Q9NXG2 353 aaKnown RBP3.64□□□□□ -1.83
VPS26A-206ENST00000489794 KCNIP1Q9NZI2 227 aa3.64□□□□□ -1.83
VPS26A-206ENST00000489794 BFARQ9NZS9 450 aa3.64□□□□□ -1.83
VPS26A-206ENST00000489794 TRAV26-1A0A087WT03 109 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 A0A0G2JN53 185 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 SERTM2A0A1B0GWG4 89 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 TCRBV9S1A1TA0A576 114 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 NCF1BA6NI72 391 aaPredicted RBP3.63□□□□□ -1.83
VPS26A-206ENST00000489794 OR52A4PA6NMU1 304 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 NCF1CA8MVU1 366 aaPredicted RBP3.63□□□□□ -1.83
VPS26A-206ENST00000489794 FOXE1O00358 373 aaPredicted RBP3.63□□□□□ -1.83
VPS26A-206ENST00000489794 NBR2O15453 112 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 MBTPS2O43462 519 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 CACNG3O60359 315 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 FCMRO60667 390 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 GIPP09681 153 aaPredicted RBP3.63□□□□□ -1.83
VPS26A-206ENST00000489794 ZNF853P0CG23 659 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 HPGDP15428 266 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 ABOP16442 354 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 RCC1P18754 421 aaPredicted RBP3.63□□□□□ -1.83
VPS26A-206ENST00000489794 FMO3P31513 532 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 VDAC2P45880 294 aaPredicted RBP3.63□□□□□ -1.83
VPS26A-206ENST00000489794 QARSP47897 775 aaKnown RBP3.63□□□□□ -1.83
VPS26A-206ENST00000489794 BCL7AQ4VC05 210 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 AGBL2Q5U5Z8 902 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 OR4F3Q6IEY1 312 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 Q6P435 159 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 TIFABQ6ZNK6 161 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 NECAB1Q8N987 351 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 MDS2Q8NDY4 140 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 OR5D13Q8NGL4 314 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 OR9G1Q8NH87 305 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 RPUSD4Q96CM3 377 aaKnown RBP3.63□□□□□ -1.83
VPS26A-206ENST00000489794 RASD2Q96D21 266 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 ITCHQ96J02 903 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 FCRL1Q96LA6 429 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 NPY6RQ99463 290 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 MRPL45Q9BRJ2 306 aaKnown RBP3.63□□□□□ -1.83
VPS26A-206ENST00000489794 RIOK1Q9BRS2 568 aaKnown RBP3.63□□□□□ -1.83
VPS26A-206ENST00000489794 NAT9Q9BTE0 207 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 CDH9Q9ULB4 789 aa3.63□□□□□ -1.83
VPS26A-206ENST00000489794 ARPC4-TTLL3A0A0A6YYG9 625 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 A0A0U1RQS6 177 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 A6NDX4 124 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 FAM166BA8MTA8 275 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 GOLGA8SH3BPF8 625 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 DNALI1O14645 258 aaPredicted RBP3.62□□□□□ -1.83
VPS26A-206ENST00000489794 RAMP3O60896 148 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 OXSR1O95747 527 aaPredicted RBP3.62□□□□□ -1.83
VPS26A-206ENST00000489794 MMP1P03956 469 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 FGF4P08620 206 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 ADRB3P13945 408 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 HMGB2P26583 209 aaKnown RBP3.62□□□□□ -1.83
VPS26A-206ENST00000489794 CASQ1P31415 396 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 CCT3P49368 545 aaKnown RBP3.62□□□□□ -1.83
VPS26A-206ENST00000489794 SUCLG1P53597 346 aaKnown RBP3.62□□□□□ -1.83
VPS26A-206ENST00000489794 HERVK_113P61574 105 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 RPL23AP62750 156 aaKnown RBP3.62□□□□□ -1.83
VPS26A-206ENST00000489794 SRSF5Q13243 272 aaKnown RBP3.62□□□□□ -1.83
VPS26A-206ENST00000489794 GPNMBQ14956 572 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 CAVIN4Q5BKX8 364 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 CARD16Q5EG05 197 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 ARMC12Q5T9G4 340 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 OR2G6Q5TZ20 316 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 ANGPTL8Q6UXH0 198 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 ACP7Q6ZNF0 438 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 CAMK2N1Q7Z7J9 78 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 PLA2G4DQ86XP0 818 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 LRRC75A-AS1Q8N1F1 130 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 ZNF433Q8N7K0 673 aaPredicted RBP3.62□□□□□ -1.83
VPS26A-206ENST00000489794 ARIH2OSQ8N7S6 290 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 Q8N9W7 124 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 FNDC5Q8NAU1 212 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 MFSD9Q8NBP5 474 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 BBOF1Q8ND07 529 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 OR51G1Q8NGK1 321 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 NDRG1Q92597 394 aaKnown RBP3.62□□□□□ -1.83
VPS26A-206ENST00000489794 ARPC1AQ92747 370 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 TMEM246Q9BRR3 403 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 RIOK2Q9BVS4 552 aaKnown RBP3.62□□□□□ -1.83
VPS26A-206ENST00000489794 EML4Q9HC35 981 aaKnown RBP3.62□□□□□ -1.83
VPS26A-206ENST00000489794 SEC14L3Q9UDX4 400 aa3.62□□□□□ -1.83
VPS26A-206ENST00000489794 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.62□□□□□ -1.83
VPS26A-206ENST00000489794 MTCL1Q9Y4B5 1905 aaKnown RBP3.62□□□□□ -1.83
VPS26A-206ENST00000489794 PDS5BQ9NTI5 1447 aa3.61□□□□□ -1.83
VPS26A-206ENST00000489794 IGLV3-16A0A075B6K0 115 aa3.61□□□□□ -1.83
VPS26A-206ENST00000489794 FAM240BA0A1B0GVZ2 78 aa3.61□□□□□ -1.83
VPS26A-206ENST00000489794 C12orf71A8MTZ7 269 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms