RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 CHRNA9Q9UGM1 479 aa5.14□□□□□ -1.59
CSDE1-207ENST00000483407 OAZ3Q9UMX2 235 aa5.14□□□□□ -1.59
CSDE1-207ENST00000483407 PCDHGB4Q9UN71 923 aa5.14□□□□□ -1.59
CSDE1-207ENST00000483407 SLC35A3Q9Y2D2 325 aa5.14□□□□□ -1.59
CSDE1-207ENST00000483407 AMDHD2Q9Y303 409 aa5.14□□□□□ -1.59
CSDE1-207ENST00000483407 HDGFL3Q9Y3E1 203 aa5.14□□□□□ -1.59
CSDE1-207ENST00000483407 KCNE3Q9Y6H6 103 aa5.14□□□□□ -1.59
CSDE1-207ENST00000483407 RNF103-CHMP3A0A140T963 221 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 A0A1W2PR80 420 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 A0A1W2PRX2 142 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 SMIM23A6NLE4 172 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 ZNF716A6NP11 495 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 UGT2B17O75795 530 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 CHRNGP07510 517 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 IGHV4-31P0DP07 118 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 KRT4P19013 534 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 RYKP34925 604 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 CLK1P49759 484 aaKnown RBP5.13□□□□□ -1.59
CSDE1-207ENST00000483407 OR2B6P58173 313 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 PRPS1P60891 318 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 RPS16P62249 146 aaKnown RBP5.13□□□□□ -1.59
CSDE1-207ENST00000483407 SNRPD2P62316 118 aaKnown RBP5.13□□□□□ -1.59
CSDE1-207ENST00000483407 HBA1P69905 142 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 HPCAP84074 193 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 SPOCK1Q08629 439 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 MAD2L1Q13257 205 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-207ENST00000483407 PMS2P11Q13670 270 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 GGTLC2Q14390 218 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 SQLEQ14534 574 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 PTGR1Q14914 329 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 PCLAFQ15004 111 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 GABRA6Q16445 453 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 VMACQ2NL98 169 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 ARHGAP11BQ3KRB8 267 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 UGT3A2Q3SY77 523 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 FAM153CQ494X1 144 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 IL23RQ5VWK5 629 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 CASP12Q6UXS9 341 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 B3GLCTQ6Y288 498 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 GRINAQ7Z429 371 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 C6orf120Q7Z4R8 191 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 C4orf33Q8N1A6 199 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 ANKRD42Q8N9B4 389 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 ZNF540Q8NDQ6 660 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 OR5AK3PQ8NH89 298 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 AGR3Q8TD06 166 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 HTRA1Q92743 480 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 ZNF524Q96C55 264 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 TUBGCP3Q96CW5 907 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 COQ8BQ96D53 544 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 ARL5BQ96KC2 179 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 SLC35G5Q96KT7 338 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 KCNS3Q9BQ31 491 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 PIMREGQ9BSJ6 248 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 NAA11Q9BSU3 229 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-207ENST00000483407 C1orf50Q9BV19 199 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 DUSP26Q9BV47 211 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 CCDC106Q9BWC9 280 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 C1QTNF6Q9BXI9 259 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 TXLNGYQ9BZA5 131 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 ZNF350Q9GZX5 532 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 C12orf65Q9H3J6 166 aaKnown RBP5.13□□□□□ -1.59
CSDE1-207ENST00000483407 NELFAQ9H3P2 528 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 CHODLQ9H9P2 273 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 SEC61A2Q9H9S3 476 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 MYOZ1Q9NP98 299 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-207ENST00000483407 CTPS2Q9NRF8 586 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 POLE3Q9NRF9 147 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 MKLN1Q9UL63 735 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 TRAPPC4Q9Y296 219 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 SLC9A8Q9Y2E8 581 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 WDR45Q9Y484 360 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 HEATR5AQ86XA9 2040 aa5.13□□□□□ -1.59
CSDE1-207ENST00000483407 LOC390937A0A1W2PQ73 354 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 TMEM233B4DJY2 109 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 PDLIM1O00151 329 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 RNASET2O00584 256 aaKnown RBP5.12□□□□□ -1.59
CSDE1-207ENST00000483407 KIAA0513O60268 411 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 FCMRO60667 390 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 EIF1BO60739 113 aaKnown RBP5.12□□□□□ -1.59
CSDE1-207ENST00000483407 SLU7O95391 586 aaKnown RBP5.12□□□□□ -1.59
CSDE1-207ENST00000483407 MT-ND5P03915 603 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 GUSBP08236 651 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 ITGA5P08648 1049 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 APEHP13798 732 aaKnown RBP5.12□□□□□ -1.59
CSDE1-207ENST00000483407 UQCRBP14927 111 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 PAX7P23759 505 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 IGFBP5P24593 272 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 ALDH3A1P30838 453 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 PGM1P36871 562 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 SERPINB5P36952 375 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 NR4A2P43354 598 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 SLC35A1P78382 337 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 RAB32Q13637 225 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 CARTPTQ16568 116 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 IQCCQ4KMZ1 466 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 XKR7Q5GH72 579 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 C6orf136Q5SQH8 315 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 FAM120AOSQ5T036 256 aa5.12□□□□□ -1.59
CSDE1-207ENST00000483407 C9orf135Q5VTT2 229 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms