RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 TSPO2Q5TGU0 170 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 FBXW9Q5XUX1 488 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 LCN8Q6JVE9 175 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 TBPL2Q6SJ96 375 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 ZNF730Q6ZMV8 503 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 Q6ZT83 130 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 C22orf34Q6ZV56 151 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 NANOGNBQ7Z5D8 188 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 UEVLDQ8IX04 471 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 NRMQ8IXM6 262 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 SCAIQ8N9R8 606 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 ADPRHL1Q8NDY3 354 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 OR52J3Q8NH60 311 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 KISS1RQ969F8 398 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-222ENST00000478095 MCUR1Q96AQ8 359 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 TMEM45BQ96B21 275 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 S100PBPQ96BU1 408 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 ASB9Q96DX5 294 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 SGTBQ96EQ0 304 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 HS6ST2Q96MM7 605 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 OXGR1Q96P68 337 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 BTBD10Q9BSF8 475 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 ACTR6Q9GZN1 396 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 FKRPQ9H9S5 495 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 NMNAT1Q9HAN9 279 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-222ENST00000478095 FANCFQ9NPI8 374 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 SLC7A10Q9NS82 523 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 PARPBPQ9NWS1 579 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 MED29Q9NX70 200 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 MRPL39Q9NYK5 338 aaKnown RBP9.07□□□□□ -0.96
HDAC6-222ENST00000478095 NDRG3Q9UGV2 375 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 ZNF229Q9UJW7 825 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 CACNA1CQ13936 2221 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 A0A087WUU8 490 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 BLOC1S5-TXNDC5H3BN57 136 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 ACOT8O14734 319 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 RNF13O43567 381 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 UPK3AO75631 287 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 RAD51DO75771 328 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 DNAJC8O75937 253 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-222ENST00000478095 KRT33AO76009 404 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 OR6A2O95222 327 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 HIST1H2ABP04908 130 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 H1F0P07305 194 aaKnown RBP9.06□□□□□ -0.96
HDAC6-222ENST00000478095 ASAH2BP0C7U1 165 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 EPXP11678 715 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 ITGA2P17301 1181 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 RHCEP18577 417 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 PSMB1P20618 241 aaKnown RBP9.06□□□□□ -0.96
HDAC6-222ENST00000478095 MAKP20794 623 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 IL32P24001 234 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 ERFP50548 548 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 SPIBQ01892 262 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 ITGADQ13349 1161 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 STK11Q15831 433 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 SFRP5Q5T4F7 317 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 CARD17Q5XLA6 110 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 PODNL1Q6PEZ8 512 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 HIST3H2AQ7L7L0 130 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 BHLHA15Q7RTS1 189 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-222ENST00000478095 TMEM200AQ86VY9 491 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 MED12LQ86YW9 2145 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 ZDHHC21Q8IVQ6 265 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 WDFY1Q8IWB7 410 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 PIK3C3Q8NEB9 887 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 SLC7A13Q8TCU3 470 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 FAM222BQ8WU58 562 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 ACOT11Q8WXI4 607 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-222ENST00000478095 HIST1H2ACQ93077 130 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 BPIFA2Q96DR5 249 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 TXNDC15Q96J42 360 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 LRGUKQ96M69 825 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 DACH2Q96NX9 599 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 ALKBH3Q96Q83 286 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-222ENST00000478095 PIP5K1AQ99755 562 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 EMC6Q9BV81 110 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 CADM1Q9BY67 442 aaKnown RBP9.06□□□□□ -0.96
HDAC6-222ENST00000478095 SLCO5A1Q9H2Y9 848 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 MUC13Q9H3R2 512 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 ASB6Q9NWX5 421 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 TAS2R5Q9NYW4 299 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 UPB1Q9UBR1 384 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 MALT1Q9UDY8 824 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 GPR52Q9Y2T5 361 aa9.06□□□□□ -0.96
HDAC6-222ENST00000478095 INTS1Q8N201 2190 aaKnown RBP9.05□□□□□ -0.96
HDAC6-222ENST00000478095 TRAV27A0A087WT01 109 aa9.05□□□□□ -0.96
HDAC6-222ENST00000478095 TRBV4-1A0A0J9YWV2 114 aa9.05□□□□□ -0.96
HDAC6-222ENST00000478095 A0A1W2PRQ8 180 aa9.05□□□□□ -0.96
HDAC6-222ENST00000478095 CIB4A0PJX0 185 aa9.05□□□□□ -0.96
HDAC6-222ENST00000478095 CASKO14936 926 aa9.05□□□□□ -0.96
HDAC6-222ENST00000478095 STAMBPO95630 424 aa9.05□□□□□ -0.96
HDAC6-222ENST00000478095 F13BP05160 661 aa9.05□□□□□ -0.96
HDAC6-222ENST00000478095 THBDP07204 575 aa9.05□□□□□ -0.96
HDAC6-222ENST00000478095 ITGA5P08648 1049 aa9.05□□□□□ -0.96
HDAC6-222ENST00000478095 SAGP10523 405 aaPredicted RBP9.05□□□□□ -0.96
HDAC6-222ENST00000478095 IFNGR1P15260 489 aa9.05□□□□□ -0.96
HDAC6-222ENST00000478095 CDH2P19022 906 aaPredicted RBP9.05□□□□□ -0.96
HDAC6-222ENST00000478095 COX5AP20674 150 aa9.05□□□□□ -0.96
HDAC6-222ENST00000478095 SSTR2P30874 369 aa9.05□□□□□ -0.96
HDAC6-222ENST00000478095 RRM2P31350 389 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms