RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 ZNF587Q96SQ5 575 aaPredicted RBP10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 PRSS27Q9BQR3 290 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 PRR14Q9BWN1 585 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 TRIM15Q9C019 465 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 PLEKHF2Q9H8W4 249 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 B3GAT1Q9P2W7 334 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 PRSS50Q9UI38 385 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 RIMS3Q9UJD0 308 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 SLC7A7Q9UM01 511 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 MAGED1Q9Y5V3 778 aaPredicted RBP10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 ANKRD17O75179 2603 aaKnown RBP10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 PDZD2O15018 2839 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 CCDC168Q8NDH2 2452 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 ENO4A6NNW6 628 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 CENPBD1B2RD01 187 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 RRP9O43818 475 aaKnown RBP10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 ZNF432O94892 652 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 MT-ND1P03886 318 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 SEMG1P04279 462 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 THBDP07204 575 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 TSPAN19P0C672 248 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 UMPSP11172 480 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 IGHV1-2P23083 117 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 KRTAP10-9P60411 292 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 FLOT2Q14254 428 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 ADAM5Q6NVV9 412 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 NHLRC1Q6VVB1 395 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 UBE2J2Q8N2K1 259 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 VANGL1Q8TAA9 524 aaPredicted RBP10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 MAGEE2Q8TD90 523 aaPredicted RBP10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 PYURFQ96I23 114 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 RADILQ96JH8 1075 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 HSH2DQ96JZ2 352 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 ADAD1Q96M93 576 aaKnown RBP10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 RAB3IPQ96QF0 476 aaPredicted RBP10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 TMEM204Q9BSN7 226 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 ESRP2Q9H6T0 727 aaKnown RBP10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 MAGIXQ9H6Y5 334 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 NANSQ9NR45 359 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 C6orf203Q9P0P8 240 aaPredicted RBP10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 UPB1Q9UBR1 384 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 A4GNTQ9UNA3 340 aa10.9□□□□□ -0.66
CLCNKA-205ENST00000477360 TCRBV3S1A0A5B6 114 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 MS4A18H0YCH9 400 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 PLPP3O14495 311 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 KLF4O43474 513 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 TRAF3IP2O43734 574 aaPredicted RBP10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 SLC43A1O75387 559 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 ZNF682O95780 498 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 HIST1H2ABP04908 130 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 ASAH2BP0C7U1 165 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 NQO1P15559 274 aaKnown RBP10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 FAPQ12884 760 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 PMS2P3Q13401 168 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 PIN1Q13526 163 aaPredicted RBP10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 SNTB1Q13884 538 aaKnown RBP10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 C1DQ13901 141 aaKnown RBP10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 TRAM2Q15035 370 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 TAB1Q15750 504 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 GABRA6Q16445 453 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 MS4A18Q3C1V0 323 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 IQCCQ4KMZ1 466 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 TSPO2Q5TGU0 170 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 FBXW10Q5XX13 1052 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 PAMR1Q6UXH9 720 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 WDR88Q6ZMY6 472 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 C20orf204Q6ZNR8 217 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 HIST3H2AQ7L7L0 130 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 HDDC2Q7Z4H3 204 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 TSPYL5Q86VY4 417 aaPredicted RBP10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 CYP4Z1Q86W10 505 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 UEVLDQ8IX04 471 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 CCDC36Q8IYA8 594 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 FAM169BQ8N8A8 192 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 PIK3C3Q8NEB9 887 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 RNF217Q8TC41 542 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 TMEM239Q8WW34 195 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 HIST1H2ACQ93077 130 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 ZNF775Q96BV0 537 aaPredicted RBP10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 DUS3LQ96G46 650 aaKnown RBP10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 TPD52L3Q96J77 140 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 LRGUKQ96M69 825 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 ZNF385AQ96PM9 386 aaKnown RBP10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 SLC7A10Q9NS82 523 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 STX18Q9P2W9 335 aaKnown RBP10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 ST6GALNAC2Q9UJ37 374 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 AMDHD2Q9Y303 409 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 MED31Q9Y3C7 131 aa10.89□□□□□ -0.67
CLCNKA-205ENST00000477360 A0A1W2PRQ8 180 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 ZNF587BE7ETH6 402 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 MGRN1O60291 552 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 ENTPD5O75356 428 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 CIB2O75838 187 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 OR6A2O95222 327 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 RAF1P04049 648 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 ITGA5P08648 1049 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 ITGA2P17301 1181 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 EDNRAP25101 427 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 LOXP28300 417 aaPredicted RBP10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 DNAJA1P31689 397 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms