RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 MED7O43513 233 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 TOP1P11387 765 aaKnown RBP4.44□□□□□ -1.7
SEC22A-204ENST00000473494 GZMAP12544 262 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 NCK1P16333 377 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 HLCSP50747 726 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 ATP1B3P54709 279 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 SH3BGRP55822 239 aaPredicted RBP4.44□□□□□ -1.7
SEC22A-204ENST00000473494 SEC61GP60059 68 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 CCNA1P78396 465 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 ZMYND11Q15326 602 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 KLHL38Q2WGJ6 581 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 FILIP1LQ4L180 1135 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 BOLA3Q53S33 107 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 GDPD3Q7L5L3 318 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 C14orf178Q8N769 122 aaPredicted RBP4.44□□□□□ -1.7
SEC22A-204ENST00000473494 RNF139Q8WU17 664 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 ZNF75CPQ92670 426 aaPredicted RBP4.44□□□□□ -1.7
SEC22A-204ENST00000473494 UBE2E3Q969T4 207 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 C10orf35Q96D05 121 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 PGLYRP4Q96LB8 373 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 MAPKAP1Q9BPZ7 522 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 NCOR1P1Q9H4R4 102 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 NHEJ1Q9H9Q4 299 aaPredicted RBP4.44□□□□□ -1.7
SEC22A-204ENST00000473494 MARCH5Q9NX47 278 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 A0A0G2JRQ6 117 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 FAM240BA0A1B0GVZ2 78 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 SGK1O00141 431 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 DCTN6O00399 190 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 ATP5LO75964 103 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 RBMY1CP0DJD4 496 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 CCDC130P13994 396 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 KLK2P20151 261 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 HMGB2P26583 209 aaKnown RBP4.43□□□□□ -1.7
SEC22A-204ENST00000473494 CALCRP30988 508 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 CCR1P32246 355 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 TAGLN2P37802 199 aaKnown RBP4.43□□□□□ -1.7
SEC22A-204ENST00000473494 BEX3Q00994 111 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 GBE1Q04446 702 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 VGLL4Q14135 290 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 KYAT1Q16773 422 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 RNF212Q495C1 297 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 CARD16Q5EG05 197 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 OR2G6Q5TZ20 316 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 C16orf87Q6PH81 154 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 SCARA5Q6ZMJ2 495 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 ACOT7LQ6ZUV0 252 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 RUFY3Q7L099 469 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 OTUD6AQ7L8S5 288 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 CEND1Q8N111 149 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 OR1E3Q8WZA6 343 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 TUBGCP3Q96CW5 907 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 SEC22AQ96IW7 307 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 RNF2Q99496 336 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 ZDHHC11Q9H8X9 412 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 TM9SF3Q9HD45 589 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 HYPKQ9NX55 129 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 DOT1LQ8TEK3 1739 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 TOGARAM1Q9Y4F4 1720 aa4.43□□□□□ -1.7
SEC22A-204ENST00000473494 NINLQ9Y2I6 1382 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 ABCC6O95255 1503 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 BTAF1O14981 1849 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 IGHV1OR21-1A0A087WYE8 117 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 OR52A4PA6NMU1 304 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 HDAC3O15379 428 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 LY6G6DO95868 133 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 TIMP1P01033 207 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 ANXA13P27216 316 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 RGRP47804 291 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 NSUN5P1Q3KNT7 163 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 CTSL3PQ5NE16 218 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 TNS2Q63HR2 1409 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 C11orf71Q6IPW1 123 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 MAGEE2Q8TD90 523 aaPredicted RBP4.42□□□□□ -1.7
SEC22A-204ENST00000473494 ST8SIA1Q92185 356 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 TIMD4Q96H15 378 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 CLCC1Q96S66 551 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 NICN1Q9BSH3 213 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 REEP4Q9H6H4 257 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 HOXC10Q9NYD6 342 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 B4GALT7Q9UBV7 327 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 ZNF639Q9UID6 485 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 RPL36Q9Y3U8 105 aaKnown RBP4.42□□□□□ -1.7
SEC22A-204ENST00000473494 SH3TC1Q8TE82 1336 aa4.42□□□□□ -1.7
SEC22A-204ENST00000473494 NHSQ6T4R5 1651 aa4.41□□□□□ -1.7
SEC22A-204ENST00000473494 NSD2O96028 1365 aa4.41□□□□□ -1.7
SEC22A-204ENST00000473494 OVOS2A0A0G2JMS6 1433 aa4.41□□□□□ -1.7
SEC22A-204ENST00000473494 A0A1W2PPE3 182 aa4.41□□□□□ -1.7
SEC22A-204ENST00000473494 STAMBPO95630 424 aa4.41□□□□□ -1.7
SEC22A-204ENST00000473494 LGI1O95970 557 aa4.41□□□□□ -1.7
SEC22A-204ENST00000473494 CCNCP24863 283 aa4.41□□□□□ -1.7
SEC22A-204ENST00000473494 GNA11P29992 359 aa4.41□□□□□ -1.7
SEC22A-204ENST00000473494 SHMT2P34897 504 aa4.41□□□□□ -1.7
SEC22A-204ENST00000473494 OPRD1P41143 372 aa4.41□□□□□ -1.7
SEC22A-204ENST00000473494 CDH4P55283 916 aa4.41□□□□□ -1.7
SEC22A-204ENST00000473494 PKNOX1P55347 436 aa4.41□□□□□ -1.7
SEC22A-204ENST00000473494 CDK16Q00536 496 aa4.41□□□□□ -1.7
SEC22A-204ENST00000473494 OR52E8Q6IFG1 317 aa4.41□□□□□ -1.7
SEC22A-204ENST00000473494 ZNF544Q6NX49 715 aa4.41□□□□□ -1.7
SEC22A-204ENST00000473494 ZYG11AQ6WRX3 759 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms