RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 OR2B2Q9GZK3 357 aa16.85■□□□□ 0.29
CAPN3-209ENST00000466222 MIXL1Q9H2W2 232 aa16.85■□□□□ 0.29
CAPN3-209ENST00000466222 ABCB9Q9NP78 766 aa16.85■□□□□ 0.29
CAPN3-209ENST00000466222 IL20Q9NYY1 176 aa16.85■□□□□ 0.29
CAPN3-209ENST00000466222 EXOGQ9Y2C4 368 aaKnown RBP16.85■□□□□ 0.29
CAPN3-209ENST00000466222 MSRB2Q9Y3D2 182 aa16.85■□□□□ 0.29
CAPN3-209ENST00000466222 FABP12A6NFH5 140 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 SHISA8B8ZZ34 492 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 RGS13O14921 159 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 HMGN1P05114 100 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 GALP22466 123 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 CFL1P23528 166 aaKnown RBP16.84■□□□□ 0.29
CAPN3-209ENST00000466222 SDC2P34741 201 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 DDOSTP39656 456 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 GPR4P46093 362 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 RFX2P48378 723 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 CCL11P51671 97 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 CDH11P55287 796 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 GPR85P60893 370 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 RPS25P62851 125 aaKnown RBP16.84■□□□□ 0.29
CAPN3-209ENST00000466222 FOXK1P85037 733 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 QPRTQ15274 297 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 BAK1Q16611 211 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 DEFB109BQ30KR1 87 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 CRTC2Q53ET0 693 aaPredicted RBP16.84■□□□□ 0.29
CAPN3-209ENST00000466222 ABHD17BQ5VST6 288 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 SLC22A10Q63ZE4 541 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 WBP2NLQ6ICG8 309 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 MBOAT2Q6ZWT7 520 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 SPATC1Q76KD6 591 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 ZNF485Q8NCK3 441 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 OR6F1Q8NGZ6 308 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 TM9SF4Q92544 642 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 SIGLEC12Q96PQ1 595 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 PPP4R1LQ9P1A2 415 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 VDAC3Q9Y277 283 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 A0A1W2PQ09 198 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 A0A1W2PQL4 384 aaPredicted RBP16.84■□□□□ 0.29
CAPN3-209ENST00000466222 CDC42EP2O14613 210 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 AKAP8O43823 692 aaKnown RBP16.84■□□□□ 0.29
CAPN3-209ENST00000466222 WDPCPO95876 746 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 LIMS3P0CW19 117 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 LIMS4P0CW20 117 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 TACR3P29371 465 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 SLC1A3P43003 542 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 CYB561P49447 251 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 MXD1Q05195 221 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 CBFBQ13951 182 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 AADACL4Q5VUY2 407 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 PSD4Q8NDX1 1056 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 OR52N1Q8NH53 320 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 DIRAS2Q96HU8 199 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 GNRHR2Q96P88 292 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 SNX18Q96RF0 628 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 HES7Q9BYE0 225 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 TPK1Q9H3S4 243 aa16.84■□□□□ 0.29
CAPN3-209ENST00000466222 LRRN3E7EW58 273 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 SURF4O15260 269 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 ZZEF1O43149 2961 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 KLF4O43474 513 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 SSX4O60224 188 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 HCN1O60741 890 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 S100A1P23297 94 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 DNASE1L1P49184 302 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 PGGHGQ32M88 737 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 OR2G6Q5TZ20 316 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 LINC00114Q6XXX2 140 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 ATG4DQ86TL0 474 aaPredicted RBP16.83■□□□□ 0.28
CAPN3-209ENST00000466222 KLHL36Q8N4N3 616 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 GATAD2BQ8WXI9 593 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 JSRP1Q96MG2 331 aaPredicted RBP16.83■□□□□ 0.28
CAPN3-209ENST00000466222 KATNB1Q9BVA0 655 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 EVA1AQ9H8M9 152 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 DEPPQ9NTK1 212 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 ASB6Q9NWX5 421 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 LRFN1Q9P244 771 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 POLHQ9Y253 713 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 CDH10Q9Y6N8 788 aa16.83■□□□□ 0.28
CAPN3-209ENST00000466222 IGKV1D-42A0A075B6H8 117 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 HMX3A6NHT5 357 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 NEURL1O76050 574 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 IGHA1P01876 353 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 HLA-DPB1P04440 258 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 MAKP20794 623 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 HTR1FP30939 366 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 ZMAT1Q5H9K5 638 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 NXNL2Q5VZ03 156 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 MISPQ8IVT2 679 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 ZNF248Q8NDW4 579 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 CCNL2Q96S94 520 aaPredicted RBP16.82■□□□□ 0.28
CAPN3-209ENST00000466222 ZNF426Q9BUY5 554 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 ANGPTL4Q9BY76 406 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 ADAM19Q9H013 955 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 TEKT2Q9UIF3 430 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 A0A087WUJ7 227 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 TMCC2O75069 709 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 CLEC2LP0C7M8 214 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 PGCP20142 388 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 SLC6A8P48029 635 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 BDH1Q02338 343 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms