RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 ZFAND1Q8TCF1 268 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 SLC2A12Q8TD20 617 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 DOK4Q8TEW6 326 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 TSPEARQ8WU66 669 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 PTPMT1Q8WUK0 201 aaPredicted RBP5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 ROPN1LQ96C74 230 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 MTERF3Q96E29 417 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 CENPNQ96H22 339 aaPredicted RBP5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 MARK4Q96L34 752 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 ZBTB18Q99592 522 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 C12orf57Q99622 126 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 ADI1Q9BV57 179 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 MUC13Q9H3R2 512 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 MMP25Q9NPA2 562 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 SPAG4Q9NPE6 437 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 AIG1Q9NVV5 245 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 MAT2BQ9NZL9 334 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 EXO1Q9UQ84 846 aaKnown RBP5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 ERVK-19Q9WJR5 959 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 MRPS7Q9Y2R9 242 aaKnown RBP5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 GPR52Q9Y2T5 361 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 NDUFAF1Q9Y375 327 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 DMRT1Q9Y5R6 373 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 ATP23Q9Y6H3 246 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 NINQ8N4C6 2090 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 USF3Q68DE3 2245 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 ANK3Q12955 4377 aaKnown RBP5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 A0A0G2JNJ9 132 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 A0A0G2JPF8 293 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 LEUTXA8MZ59 168 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 MYO1GB0I1T2 1018 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 HNRNPCL3B7ZW38 293 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 LOC110117498-PIK3R3F6TDL0 507 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 CTDSP2O14595 271 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 ABCD4O14678 606 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 TSPAN4O14817 238 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 CFLARO15519 480 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 TBX19O60806 448 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 BCAS1O75363 584 aaPredicted RBP5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 SLC22A3O75751 556 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 ZFAND5O76080 213 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 SOX30O94993 753 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 PRSS23O95084 383 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 S100A8P05109 93 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 S100A9P06702 114 aaKnown RBP5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 GNAO1P09471 354 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 HNRNPCL4P0DMR1 293 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 GLI4P10075 376 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 LAMP1P11279 417 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 PSKH1P11801 424 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 FCGR1AP12314 374 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 POU2F1P14859 743 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 S100PP25815 95 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 NOS3P29474 1203 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 S100A3P33764 101 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 TRHRP34981 398 aaPredicted RBP5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 ATP6V1E1P36543 226 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 CAPGP40121 348 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 RPS5P46782 204 aaKnown RBP5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 MEOX2P50222 304 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 GBX2P52951 348 aaPredicted RBP5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 UFM1P61960 85 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 OC90Q02509 493 aaPredicted RBP5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 DUSP2Q05923 314 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 HSPB3Q12988 150 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 PDE7AQ13946 482 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 CAPRIN1Q14444 709 aaKnown RBP5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 LTB4RQ15722 352 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 PRICKLE4Q2TBC4 344 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 SLC25A35Q3KQZ1 300 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 CHRFAM7AQ494W8 412 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 GXYLT1Q4G148 440 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 KLHL12Q53G59 568 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 ZMAT1Q5H9K5 638 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 COQ5Q5HYK3 327 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 HLA-DQA1Q5Y7H0 255 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 XAF1Q6GPH4 301 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 TYW3Q6IPR3 259 aaKnown RBP5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 H3F3CQ6NXT2 135 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 FAM111BQ6SJ93 734 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 HSDL2Q6YN16 418 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 SLC29A4Q7RTT9 530 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 ZNF551Q7Z340 670 aaPredicted RBP5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 WDR53Q7Z5U6 358 aaPredicted RBP5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 THAP5Q7Z6K1 395 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 NOXA1Q86UR1 476 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 SLC22A16Q86VW1 577 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 LYSMD2Q8IV50 215 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 RIMKLAQ8IXN7 391 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 CADM2Q8N3J6 435 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 SLC5A8Q8N695 610 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 HORMAD2Q8N7B1 307 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 DTX3Q8N9I9 347 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 PSD4Q8NDX1 1056 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 NFAM1Q8NET5 270 aaPredicted RBP5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 SETD6Q8TBK2 473 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 ELP5Q8TE02 316 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 ZNF721Q8TF20 911 aa5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 DNAJA4Q8WW22 397 aaPredicted RBP5.41□□□□□ -1.54
SMARCC1-204ENST00000462198 KAT2AQ92830 837 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms