RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 FAIMQ9NVQ4 179 aa20.16■□□□□ 0.82
PTPN4-208ENST00000460289 SLC7A7Q9UM01 511 aa20.16■□□□□ 0.82
PTPN4-208ENST00000460289 ELOVL7A1L3X0 281 aa20.15■□□□□ 0.82
PTPN4-208ENST00000460289 SHISA9B4DS77 424 aa20.15■□□□□ 0.82
PTPN4-208ENST00000460289 M0R1B8 84 aa20.15■□□□□ 0.82
PTPN4-208ENST00000460289 UPK3AO75631 287 aa20.15■□□□□ 0.82
PTPN4-208ENST00000460289 DANCRP0C864 163 aa20.15■□□□□ 0.82
PTPN4-208ENST00000460289 KDELR2P33947 212 aa20.15■□□□□ 0.82
PTPN4-208ENST00000460289 PTH2RP49190 550 aa20.15■□□□□ 0.82
PTPN4-208ENST00000460289 SH3BGRP55822 239 aaPredicted RBP20.15■□□□□ 0.82
PTPN4-208ENST00000460289 LGALS3BPQ08380 585 aa20.15■□□□□ 0.82
PTPN4-208ENST00000460289 PUDPQ08623 228 aa20.15■□□□□ 0.82
PTPN4-208ENST00000460289 CARM1Q86X55 608 aa20.15■□□□□ 0.82
PTPN4-208ENST00000460289 MICU2Q8IYU8 434 aa20.15■□□□□ 0.82
PTPN4-208ENST00000460289 GPR137CQ8N3F9 429 aa20.15■□□□□ 0.82
PTPN4-208ENST00000460289 PIK3C3Q8NEB9 887 aa20.15■□□□□ 0.82
PTPN4-208ENST00000460289 OR1K1Q8NGR3 316 aa20.15■□□□□ 0.82
PTPN4-208ENST00000460289 NEUROG1Q92886 237 aa20.15■□□□□ 0.82
PTPN4-208ENST00000460289 ALKBH3Q96Q83 286 aaPredicted RBP20.15■□□□□ 0.82
PTPN4-208ENST00000460289 C1QTNF6Q9BXI9 259 aa20.15■□□□□ 0.82
PTPN4-208ENST00000460289 POLR2J2Q9GZM3 115 aaKnown RBP20.15■□□□□ 0.82
PTPN4-208ENST00000460289 POLR2J3Q9H1A7 115 aaKnown RBP20.15■□□□□ 0.82
PTPN4-208ENST00000460289 ZNF701Q9NV72 531 aaPredicted RBP20.15■□□□□ 0.82
PTPN4-208ENST00000460289 USP22Q9UPT9 525 aa20.15■□□□□ 0.82
PTPN4-208ENST00000460289 NOX1Q9Y5S8 564 aa20.15■□□□□ 0.82
PTPN4-208ENST00000460289 ARID1AO14497 2285 aa20.15■□□□□ 0.82
PTPN4-208ENST00000460289 RPL36A-HNRNPH2H7BZ11 118 aa20.14■□□□□ 0.81
PTPN4-208ENST00000460289 LYPD3O95274 346 aa20.14■□□□□ 0.81
PTPN4-208ENST00000460289 THY1P04216 161 aa20.14■□□□□ 0.81
PTPN4-208ENST00000460289 PTNP21246 168 aa20.14■□□□□ 0.81
PTPN4-208ENST00000460289 SEC24CP53992 1094 aa20.14■□□□□ 0.81
PTPN4-208ENST00000460289 CDH11P55287 796 aa20.14■□□□□ 0.81
PTPN4-208ENST00000460289 ROR2Q01974 943 aaKnown RBP20.14■□□□□ 0.81
PTPN4-208ENST00000460289 SLC22A25Q6T423 547 aa20.14■□□□□ 0.81
PTPN4-208ENST00000460289 PXKQ7Z7A4 578 aa20.14■□□□□ 0.81
PTPN4-208ENST00000460289 OR5J2Q8NH18 312 aa20.14■□□□□ 0.81
PTPN4-208ENST00000460289 NSRP1Q9H0G5 558 aaKnown RBP20.14■□□□□ 0.81
PTPN4-208ENST00000460289 DLL4Q9NR61 685 aa20.14■□□□□ 0.81
PTPN4-208ENST00000460289 CMTM6Q9NX76 183 aa20.14■□□□□ 0.81
PTPN4-208ENST00000460289 CADP27708 2225 aa20.13■□□□□ 0.81
PTPN4-208ENST00000460289 PLPP3O14495 311 aa20.13■□□□□ 0.81
PTPN4-208ENST00000460289 TRAF3IP2O43734 574 aaPredicted RBP20.13■□□□□ 0.81
PTPN4-208ENST00000460289 OR6A2O95222 327 aa20.13■□□□□ 0.81
PTPN4-208ENST00000460289 HOXB1P14653 301 aaPredicted RBP20.13■□□□□ 0.81
PTPN4-208ENST00000460289 AHCYP23526 432 aa20.13■□□□□ 0.81
PTPN4-208ENST00000460289 TBRG1Q3YBR2 411 aa20.13■□□□□ 0.81
PTPN4-208ENST00000460289 LRRC23Q53EV4 343 aaPredicted RBP20.13■□□□□ 0.81
PTPN4-208ENST00000460289 HIKESHIQ53FT3 197 aa20.13■□□□□ 0.81
PTPN4-208ENST00000460289 CYBRD1Q53TN4 286 aa20.13■□□□□ 0.81
PTPN4-208ENST00000460289 ANKRD16Q6P6B7 361 aa20.13■□□□□ 0.81
PTPN4-208ENST00000460289 WDR88Q6ZMY6 472 aa20.13■□□□□ 0.81
PTPN4-208ENST00000460289 LINGO2Q7L985 606 aa20.13■□□□□ 0.81
PTPN4-208ENST00000460289 YTHDF3Q7Z739 585 aaKnown RBP20.13■□□□□ 0.81
PTPN4-208ENST00000460289 SLC15A3Q8IY34 581 aa20.13■□□□□ 0.81
PTPN4-208ENST00000460289 MAGEE2Q8TD90 523 aaPredicted RBP20.13■□□□□ 0.81
PTPN4-208ENST00000460289 OR2M2Q96R28 347 aa20.13■□□□□ 0.81
PTPN4-208ENST00000460289 ZNF426Q9BUY5 554 aa20.13■□□□□ 0.81
PTPN4-208ENST00000460289 POU2F3Q9UKI9 436 aa20.13■□□□□ 0.81
PTPN4-208ENST00000460289 LRRN3E7EW58 273 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 NDUFAB1O14561 156 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 HPRP00739 348 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 SOD3P08294 240 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 HLA-DOBP13765 273 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 TAS2R41P59536 307 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 UBE2NP61088 152 aaKnown RBP20.12■□□□□ 0.81
PTPN4-208ENST00000460289 SELENOWP63302 87 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 SLC25A3Q00325 362 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 POU3F1Q03052 451 aaPredicted RBP20.12■□□□□ 0.81
PTPN4-208ENST00000460289 ZNF74Q16587 644 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 PGGHGQ32M88 737 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 HACD2Q6Y1H2 254 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 CPLX4Q7Z7G2 160 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 TSPYL5Q86VY4 417 aaPredicted RBP20.12■□□□□ 0.81
PTPN4-208ENST00000460289 LZICQ8WZA0 190 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 BCL2L2Q92843 193 aaPredicted RBP20.12■□□□□ 0.81
PTPN4-208ENST00000460289 GTPBP3Q969Y2 492 aaKnown RBP20.12■□□□□ 0.81
PTPN4-208ENST00000460289 CMTM5Q96DZ9 223 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 TRMT61AQ96FX7 289 aaKnown RBP20.12■□□□□ 0.81
PTPN4-208ENST00000460289 LRR1Q96L50 414 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 GRIP2Q9C0E4 1043 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 ALG2Q9H553 416 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 FKRPQ9H9S5 495 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 GPR35Q9HC97 309 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 MOV10Q9HCE1 1003 aaKnown RBP20.12■□□□□ 0.81
PTPN4-208ENST00000460289 NANSQ9NR45 359 aa20.12■□□□□ 0.81
PTPN4-208ENST00000460289 ZNF726A6NNF4 738 aa20.11■□□□□ 0.81
PTPN4-208ENST00000460289 OVOL3O00110 214 aa20.11■□□□□ 0.81
PTPN4-208ENST00000460289 OR5F1O95221 314 aa20.11■□□□□ 0.81
PTPN4-208ENST00000460289 CH25HO95992 272 aa20.11■□□□□ 0.81
PTPN4-208ENST00000460289 HIST1H2ABP04908 130 aa20.11■□□□□ 0.81
PTPN4-208ENST00000460289 ADORA3P0DMS8 318 aa20.11■□□□□ 0.81
PTPN4-208ENST00000460289 ATP5J2P56134 94 aa20.11■□□□□ 0.81
PTPN4-208ENST00000460289 LIPEQ05469 1076 aa20.11■□□□□ 0.81
PTPN4-208ENST00000460289 DEF8Q6ZN54 512 aa20.11■□□□□ 0.81
PTPN4-208ENST00000460289 HIST3H2AQ7L7L0 130 aa20.11■□□□□ 0.81
PTPN4-208ENST00000460289 TREML1Q86YW5 311 aa20.11■□□□□ 0.81
PTPN4-208ENST00000460289 TMEM123Q8N131 208 aa20.11■□□□□ 0.81
PTPN4-208ENST00000460289 HIST1H2ACQ93077 130 aa20.11■□□□□ 0.81
PTPN4-208ENST00000460289 C18orf12Q96KH6 178 aa20.11■□□□□ 0.81
PTPN4-208ENST00000460289 FAM107BQ9H098 131 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms