RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 SCGNO76038 276 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 SFTPBP07988 381 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 HOXB3P14651 431 aaPredicted RBP9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 P2RX1P51575 399 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 SLC35A1P78382 337 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 PUDPQ08623 228 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 SF3A2Q15428 464 aaKnown RBP9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 MEP1BQ16820 701 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 COL28A1Q2UY09 1125 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 FCRLAQ7L513 359 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 AAED1Q7RTV5 226 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 RTTNQ86VV8 2226 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 SLC43A2Q8N370 569 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 CADM4Q8NFZ8 388 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 KCTD12Q96CX2 325 aaKnown RBP9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 WDR76Q9H967 626 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 KCND3Q9UK17 655 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 ADAM18Q9Y3Q7 739 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 KCNE3Q9Y6H6 103 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 ZSCAN5BA6NJL1 495 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 MT-ATP6P00846 226 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 IL7P13232 177 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 MSX1P28360 303 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 MAN2A2P49641 1150 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 CLDN12P56749 244 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 EXT1Q16394 746 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 C9orf135Q5VTT2 229 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 KMT5CQ86Y97 462 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 LAX1Q8IWV1 398 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 CLDN22Q8N7P3 220 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 ZNF611Q8N823 705 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 MFSD8Q8NHS3 518 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 NRTNQ99748 197 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 M0R082 166 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 DDAH2O95865 285 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 SNRPBP14678 240 aaKnown RBP9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 CEBPGP53567 150 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 MRPS10P82664 201 aaKnown RBP9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 TMEM71Q6P5X7 295 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 NDUFAF7Q7L592 441 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 VN1R4Q7Z5H5 301 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 SLC7A5P1Q8MH63 180 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 MAFAQ8NHW3 353 aaPredicted RBP9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 GPBAR1Q8TDU6 330 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 MNTQ99583 582 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 ZNF471Q9BX82 626 aaPredicted RBP9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 CMC2Q9NRP2 79 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 EMC3Q9P0I2 261 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 CHRNA9Q9UGM1 479 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 KIF13BQ9NQT8 1826 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 TMEM129A0AVI4 362 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 TMEM212A6NML5 194 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 MEN1O00255 615 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 P2RX6O15547 441 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 GNRHRP30968 328 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 EPHA4P54764 986 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 SOWAHCQ53LP3 525 aaPredicted RBP9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 RAB11FIP2Q7L804 512 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 PRSS41Q7RTY9 318 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 LIX1LQ8IVB5 337 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 LINC00346Q8IVM7 164 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 PHC2Q8IXK0 858 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 PM20D2Q8IYS1 436 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 OR5H2Q8NGV7 314 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 OR2T35Q8NGX2 323 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 WIF1Q9Y5W5 379 aa9.23□□□□□ -0.93
CSGALNACT1-203ENST00000454498 PLXNA1Q9UIW2 1896 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 IGHV1OR15-9A0A0B4J2B8 117 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 LOC102725191A0A1B0GVB3 256 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 PCP4L1A6NKN8 68 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 GREM1O60565 184 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 TBX19O60806 448 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 GLCEO94923 617 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 ZNF35P13682 527 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 GPR3P46089 330 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 CYB561P49447 251 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 NKX2-5P52952 324 aaPredicted RBP9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 MLC1Q15049 377 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 HYAL4Q2M3T9 481 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 H1FNTQ75WM6 255 aaPredicted RBP9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 GALNT11Q8NCW6 608 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 OR51T1Q8NGJ9 327 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 OR13C9Q8NGT0 318 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 TM9SF4Q92544 642 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 C7orf34Q96L11 122 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 FER1L6-AS2Q96M78 137 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 OR14A2Q96R54 314 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 SEMA4CQ9C0C4 833 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 CDCP1Q9H5V8 836 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 RANBP3Q9H6Z4 567 aaPredicted RBP9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 PARPBPQ9NWS1 579 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 CACNG2Q9Y698 323 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 MEIS3P1A6NDR6 274 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 ZNF736B4DX44 427 aaPredicted RBP9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 NUDT21O43809 227 aaKnown RBP9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 EIF1BO60739 113 aaKnown RBP9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 PRAMEF4O60810 478 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 SLC2A10O95528 541 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 DIRAS3O95661 229 aa9.22□□□□□ -0.93
CSGALNACT1-203ENST00000454498 SERPINA5P05154 406 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms