RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 NRMQ8IXM6 262 aa24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 ZNF295-AS1Q8N0V1 137 aa24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 ZNF347Q96SE7 839 aa24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 TRIM15Q9C019 465 aa24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 LRMDAQ9H2I8 198 aa24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 MMADHCQ9H3L0 296 aaPredicted RBP24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 CRIM1Q9NZV1 1036 aa24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 SLC7A8Q9UHI5 535 aa24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 GPR52Q9Y2T5 361 aa24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 NOX1Q9Y5S8 564 aa24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 AQP12BA6NM10 295 aa24.72■■□□□ 1.55
SMARCC1-203ENST00000454240 IGHV3-9P01782 118 aa24.72■■□□□ 1.55
SMARCC1-203ENST00000454240 TSPAN19P0C672 248 aa24.72■■□□□ 1.55
SMARCC1-203ENST00000454240 CLDN17P56750 224 aa24.72■■□□□ 1.55
SMARCC1-203ENST00000454240 SMIM11AP58511 58 aa24.72■■□□□ 1.55
SMARCC1-203ENST00000454240 IL1RL1Q01638 556 aa24.72■■□□□ 1.55
SMARCC1-203ENST00000454240 SFRP5Q5T4F7 317 aa24.72■■□□□ 1.55
SMARCC1-203ENST00000454240 TSPO2Q5TGU0 170 aa24.72■■□□□ 1.55
SMARCC1-203ENST00000454240 AQP12AQ8IXF9 295 aa24.72■■□□□ 1.55
SMARCC1-203ENST00000454240 FAM222BQ8WU58 562 aa24.72■■□□□ 1.55
SMARCC1-203ENST00000454240 FUZQ9BT04 418 aa24.72■■□□□ 1.55
SMARCC1-203ENST00000454240 HDHD5Q9BXW7 423 aa24.72■■□□□ 1.55
SMARCC1-203ENST00000454240 SLC7A10Q9NS82 523 aa24.72■■□□□ 1.55
SMARCC1-203ENST00000454240 MALT1Q9UDY8 824 aa24.72■■□□□ 1.55
SMARCC1-203ENST00000454240 NDRG3Q9UGV2 375 aa24.72■■□□□ 1.55
SMARCC1-203ENST00000454240 RCE1Q9Y256 329 aa24.72■■□□□ 1.55
SMARCC1-203ENST00000454240 TESMINQ9Y4I5 508 aa24.72■■□□□ 1.55
SMARCC1-203ENST00000454240 ZNF432O94892 652 aa24.71■■□□□ 1.55
SMARCC1-203ENST00000454240 OR6A2O95222 327 aa24.71■■□□□ 1.55
SMARCC1-203ENST00000454240 COX5AP20674 150 aa24.71■■□□□ 1.55
SMARCC1-203ENST00000454240 MAKP20794 623 aa24.71■■□□□ 1.55
SMARCC1-203ENST00000454240 AHCYP23526 432 aa24.71■■□□□ 1.55
SMARCC1-203ENST00000454240 SELENOPP49908 381 aa24.71■■□□□ 1.55
SMARCC1-203ENST00000454240 ITGADQ13349 1161 aa24.71■■□□□ 1.55
SMARCC1-203ENST00000454240 FAM98BQ52LJ0 330 aaKnown RBP24.71■■□□□ 1.55
SMARCC1-203ENST00000454240 NANOGNBQ7Z5D8 188 aa24.71■■□□□ 1.55
SMARCC1-203ENST00000454240 UBE2J2Q8N2K1 259 aa24.71■■□□□ 1.55
SMARCC1-203ENST00000454240 DACH2Q96NX9 599 aa24.71■■□□□ 1.55
SMARCC1-203ENST00000454240 OR10A4Q9H209 315 aa24.71■■□□□ 1.55
SMARCC1-203ENST00000454240 ANKHD1Q8IWZ3 2542 aaKnown RBP24.71■■□□□ 1.55
SMARCC1-203ENST00000454240 TRBV4-1A0A0J9YWV2 114 aa24.7■■□□□ 1.54
SMARCC1-203ENST00000454240 SH3D21A4FU49 640 aa24.7■■□□□ 1.54
SMARCC1-203ENST00000454240 GADD45GO95257 159 aa24.7■■□□□ 1.54
SMARCC1-203ENST00000454240 IGHV1-2P23083 117 aa24.7■■□□□ 1.54
SMARCC1-203ENST00000454240 SPIBQ01892 262 aa24.7■■□□□ 1.54
SMARCC1-203ENST00000454240 POU3F1Q03052 451 aaPredicted RBP24.7■■□□□ 1.54
SMARCC1-203ENST00000454240 CHRNB3Q05901 458 aa24.7■■□□□ 1.54
SMARCC1-203ENST00000454240 FLOT2Q14254 428 aa24.7■■□□□ 1.54
SMARCC1-203ENST00000454240 FGD3Q5JSP0 725 aa24.7■■□□□ 1.54
SMARCC1-203ENST00000454240 NIPAL3Q6P499 406 aa24.7■■□□□ 1.54
SMARCC1-203ENST00000454240 CCDC121Q6ZUS5 278 aa24.7■■□□□ 1.54
SMARCC1-203ENST00000454240 RRM2BQ7LG56 351 aa24.7■■□□□ 1.54
SMARCC1-203ENST00000454240 OR52J3Q8NH60 311 aa24.7■■□□□ 1.54
SMARCC1-203ENST00000454240 WFIKKN1Q96NZ8 548 aa24.7■■□□□ 1.54
SMARCC1-203ENST00000454240 SLCO5A1Q9H2Y9 848 aa24.7■■□□□ 1.54
SMARCC1-203ENST00000454240 ASB6Q9NWX5 421 aa24.7■■□□□ 1.54
SMARCC1-203ENST00000454240 ALPK2Q86TB3 2170 aa24.7■■□□□ 1.54
SMARCC1-203ENST00000454240 DCHS2Q6V1P9 2916 aa24.69■■□□□ 1.54
SMARCC1-203ENST00000454240 C11orf98E9PRG8 122 aa24.69■■□□□ 1.54
SMARCC1-203ENST00000454240 BLOC1S5-TXNDC5H3BN57 136 aa24.69■■□□□ 1.54
SMARCC1-203ENST00000454240 PDLIM1O00151 329 aa24.69■■□□□ 1.54
SMARCC1-203ENST00000454240 EBAG9O00559 213 aa24.69■■□□□ 1.54
SMARCC1-203ENST00000454240 EPXP11678 715 aa24.69■■□□□ 1.54
SMARCC1-203ENST00000454240 FAPQ12884 760 aa24.69■■□□□ 1.54
SMARCC1-203ENST00000454240 SEC23BQ15437 767 aa24.69■■□□□ 1.54
SMARCC1-203ENST00000454240 TMPRSS11FQ6ZWK6 438 aa24.69■■□□□ 1.54
SMARCC1-203ENST00000454240 ASRGL1Q7L266 308 aa24.69■■□□□ 1.54
SMARCC1-203ENST00000454240 ADGRG5Q8IZF4 528 aa24.69■■□□□ 1.54
SMARCC1-203ENST00000454240 CDK20Q8IZL9 346 aa24.69■■□□□ 1.54
SMARCC1-203ENST00000454240 POMGNT2Q8NAT1 580 aa24.69■■□□□ 1.54
SMARCC1-203ENST00000454240 ANKK1Q8NFD2 765 aa24.69■■□□□ 1.54
SMARCC1-203ENST00000454240 C14orf79Q96F83 325 aa24.69■■□□□ 1.54
SMARCC1-203ENST00000454240 UPB1Q9UBR1 384 aa24.69■■□□□ 1.54
SMARCC1-203ENST00000454240 SETXQ7Z333 2677 aaKnown RBP24.68■■□□□ 1.54
SMARCC1-203ENST00000454240 OR6C65A6NJZ3 312 aa24.68■■□□□ 1.54
SMARCC1-203ENST00000454240 RRM2P31350 389 aa24.68■■□□□ 1.54
SMARCC1-203ENST00000454240 RPL18Q07020 188 aaKnown RBP24.68■■□□□ 1.54
SMARCC1-203ENST00000454240 TSC22D1Q15714 1073 aa24.68■■□□□ 1.54
SMARCC1-203ENST00000454240 ANKRD34AQ69YU3 496 aa24.68■■□□□ 1.54
SMARCC1-203ENST00000454240 C22orf34Q6ZV56 151 aa24.68■■□□□ 1.54
SMARCC1-203ENST00000454240 MEX3DQ86XN8 651 aaKnown RBP24.68■■□□□ 1.54
SMARCC1-203ENST00000454240 STEAP2Q8NFT2 490 aa24.68■■□□□ 1.54
SMARCC1-203ENST00000454240 KISS1RQ969F8 398 aaPredicted RBP24.68■■□□□ 1.54
SMARCC1-203ENST00000454240 TXNDC15Q96J42 360 aa24.68■■□□□ 1.54
SMARCC1-203ENST00000454240 LINC00470Q9BZP3 86 aa24.68■■□□□ 1.54
SMARCC1-203ENST00000454240 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.68■■□□□ 1.54
SMARCC1-203ENST00000454240 HIF3AQ9Y2N7 669 aa24.68■■□□□ 1.54
SMARCC1-203ENST00000454240 CENPEQ02224 2701 aa24.68■■□□□ 1.54
SMARCC1-203ENST00000454240 SH3PXD2BA1X283 911 aa24.67■■□□□ 1.54
SMARCC1-203ENST00000454240 RNF13O43567 381 aa24.67■■□□□ 1.54
SMARCC1-203ENST00000454240 AKAP8O43823 692 aaKnown RBP24.67■■□□□ 1.54
SMARCC1-203ENST00000454240 RAP2AP10114 183 aa24.67■■□□□ 1.54
SMARCC1-203ENST00000454240 PPP3CBP16298 524 aa24.67■■□□□ 1.54
SMARCC1-203ENST00000454240 AQP2P41181 271 aa24.67■■□□□ 1.54
SMARCC1-203ENST00000454240 HMGA2P52926 109 aa24.67■■□□□ 1.54
SMARCC1-203ENST00000454240 ZNF433Q8N7K0 673 aaPredicted RBP24.67■■□□□ 1.54
SMARCC1-203ENST00000454240 OR4K5Q8NGD3 323 aa24.67■■□□□ 1.54
SMARCC1-203ENST00000454240 CANT1Q8WVQ1 401 aa24.67■■□□□ 1.54
SMARCC1-203ENST00000454240 OR2M2Q96R28 347 aa24.67■■□□□ 1.54
SMARCC1-203ENST00000454240 ACTR6Q9GZN1 396 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms