RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 BBS1Q8NFJ9 593 aa8.56□□□□□ -1.04
SMPD4P1-203ENST00000443839 SNIP1Q8TAD8 396 aaKnown RBP8.56□□□□□ -1.04
SMPD4P1-203ENST00000443839 SMPDL3BQ92485 455 aa8.56□□□□□ -1.04
SMPD4P1-203ENST00000443839 RASD2Q96D21 266 aa8.56□□□□□ -1.04
SMPD4P1-203ENST00000443839 MED20Q9H944 212 aa8.56□□□□□ -1.04
SMPD4P1-203ENST00000443839 ALKBH4Q9NXW9 302 aa8.56□□□□□ -1.04
SMPD4P1-203ENST00000443839 TAS2R5Q9NYW4 299 aa8.56□□□□□ -1.04
SMPD4P1-203ENST00000443839 KLHL21Q9UJP4 597 aa8.56□□□□□ -1.04
SMPD4P1-203ENST00000443839 HDGFL3Q9Y3E1 203 aa8.56□□□□□ -1.04
SMPD4P1-203ENST00000443839 IGF2RP11717 2491 aa8.56□□□□□ -1.04
SMPD4P1-203ENST00000443839 A0A1W2PNR3 127 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 KLRC4-KLRK1H3BQV0 150 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 PLPP3O14495 311 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 EFSO43281 561 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 TLX3O43711 291 aaPredicted RBP8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 NME2P1O60361 137 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 PLGP00747 810 aaPredicted RBP8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 TSPAN19P0C672 248 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 IMPDH2P12268 514 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 APEHP13798 732 aaKnown RBP8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 NME2P22392 152 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 SDHAP31040 664 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 ATP6V1E1P36543 226 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 MAP2K4P45985 399 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 SLC15A1P46059 708 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 CLK1P49759 484 aaKnown RBP8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 MVKQ03426 396 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 EMX1Q04741 257 aaPredicted RBP8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 C19orf57Q0VDD7 668 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 ZNF362Q5T0B9 420 aaPredicted RBP8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 XAF1Q6GPH4 301 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 SLC25A25Q6KCM7 469 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 NIPAL3Q6P499 406 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 H1FNTQ75WM6 255 aaPredicted RBP8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 JAZF1Q86VZ6 243 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 CLVS1Q8IUQ0 354 aaPredicted RBP8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 LRRC75AQ8NAA5 344 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 DRAXINQ8NBI3 349 aaPredicted RBP8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 FAM83FQ8NEG4 500 aaPredicted RBP8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 HAS2Q92819 552 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 RNFT2Q96EX2 444 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 Q96M85 177 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 OR51V1Q9H2C8 321 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 INIPQ9NRY2 104 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 METRNQ9UJH8 293 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 WASF3Q9UPY6 502 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 MSRB2Q9Y3D2 182 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 KCNMB2Q9Y691 235 aa8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 MAP1BP46821 2468 aaKnown RBP8.55□□□□□ -1.04
SMPD4P1-203ENST00000443839 NCKAP5O14513 1909 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 IRGMA1A4Y4 181 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 GJE1A6NN92 205 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 AKR7A3O95154 331 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 APOL3O95236 402 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 SHC1P29353 583 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 HTR1FP30939 366 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 TTKP33981 857 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 OR2B6P58173 313 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 PLGLB1Q02325 96 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 PUDPQ08623 228 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 RAB40BQ12829 278 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 KRR1Q13601 381 aaKnown RBP8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 KLHL22Q53GT1 634 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 GPR139Q6DWJ6 353 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 FAM122BQ7Z309 247 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 GHDCQ8N2G8 530 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 SLC37A3Q8NCC5 494 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 ZNF420Q8TAQ5 688 aaPredicted RBP8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 RORBQ92753 470 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 PTP4A1Q93096 173 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 C12orf43Q96C57 262 aaKnown RBP8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 TMEM80Q96HE8 168 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 SFXN2Q96NB2 322 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 TSPAN32Q96QS1 320 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 SIGLEC11Q96RL6 698 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 NMNAT3Q96T66 252 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 DOK1Q99704 481 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 HCAR1Q9BXC0 346 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 ZNF703Q9H7S9 590 aaPredicted RBP8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 CHST11Q9NPF2 352 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 B3GALT5Q9Y2C3 310 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 PCDHGB1Q9Y5G3 927 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 ATMQ13315 3056 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 A0A1W2PRG6 482 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 SLC22A31A6NKX4 558 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 SULT2B1O00204 365 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 XKRYO14609 159 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 GYPBP06028 91 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 PCMT1P22061 227 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 DCKP27707 260 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 DIO1P49895 249 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 RAB39AQ14964 217 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 ZNF766Q5HY98 468 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 EMC4Q5J8M3 183 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 WIPI1Q5MNZ9 446 aaPredicted RBP8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 GTF2IRD2BQ6EKJ0 949 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 LEG1Q6P5S2 330 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 MEPCEQ7L2J0 689 aaKnown RBP8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 GTF2IRD2Q86UP8 949 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms