RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 SPAG9O60271 1321 aaKnown RBP0.79□□□□□ -2.28
RNU2-54P-201ENST00000410299 GSAPA4D1B5 854 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 LOC110117498-PIK3R3F6TDL0 507 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 SGK1O00141 431 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 XKRYO14609 159 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 PFKFB2O60825 505 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 CCNKO75909 580 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 CDRT1O95170 752 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 PTBP3O95758 552 aaKnown RBP0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 CSF3P09919 207 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 GKN3PP0CG01 181 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 CMA1P23946 247 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 GYG1P46976 350 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 GSSP48637 474 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 NCBP2P52298 156 aaKnown RBP eCLIP0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 NUCB2P80303 420 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 ASPHQ12797 758 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 PDIA2Q13087 525 aaKnown RBP0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 SRSF5Q13243 272 aaKnown RBP0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 IRF4Q15306 451 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 SLC15A2Q16348 729 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 TTLL9Q3SXZ7 439 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 ZBED5Q49AG3 693 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 TPGS2Q68CL5 300 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 OR52E8Q6IFG1 317 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 LRRC8BQ6P9F7 803 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 AFTPHQ6ULP2 937 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 NTM-AS1Q6ZSK4 140 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 LINC00173Q6ZV60 143 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 LGI3Q8N145 548 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 MSANTD4Q8NCY6 345 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 RNF139Q8WU17 664 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 WFIKKN1Q96NZ8 548 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 NIPSNAP3BQ9BS92 247 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 MRPL13Q9BYD1 178 aaKnown RBP0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 RBKSQ9H477 322 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 MEAF6Q9HAF1 191 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 C12orf10Q9HB07 376 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 SLC17A5Q9NRA2 495 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 RASD1Q9Y272 281 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 RPL36Q9Y3U8 105 aaKnown RBP0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 S4R3C0 116 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 PRRC2BQ5JSZ5 2229 aaKnown RBP0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 NCAPD2Q15021 1401 aa0.78□□□□□ -2.28
RNU2-54P-201ENST00000410299 LTBP4Q8N2S1 1624 aa0.78□□□□□ -2.29
RNU2-54P-201ENST00000410299 FCGBPQ9Y6R7 5405 aaPredicted RBP0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 A0A1W2PNV4 684 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 CIB4A0PJX0 185 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 NPIPA7E9PJI5 369 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 H0YHG0 523 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 H3BNH8 94 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 ZNF207O43670 478 aaKnown RBP0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 OR1F1O43749 312 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 NEBLO76041 1014 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 IGHG4P01861 327 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 P0C880 135 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 UBTFL1P0CB47 393 aaPredicted RBP0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 NPIPA8P0DM63 369 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 NT5EP21589 574 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 DNAJB1P25685 340 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 SOX6P35712 828 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 TDO2P48775 406 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 SLC7A9P82251 487 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 ZNF816Q0VGE8 651 aaPredicted RBP0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 CCDC184Q52MB2 194 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 CARD16Q5EG05 197 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 HES5Q5TA89 166 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 GALNT17Q6IS24 598 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 KCNIP4Q6PIL6 250 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 HSDL2Q6YN16 418 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 PGAP1Q75T13 922 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 MOB3BQ86TA1 216 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 BIVMQ86UB2 503 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 ZNF573Q86YE8 665 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 ZDHHC21Q8IVQ6 265 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 CLEC4FQ8N1N0 589 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 CLDN19Q8N6F1 224 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 NECAP1Q8NC96 275 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 STXBP6Q8NFX7 210 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 OR10G4Q8NGN3 311 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 MRPL38Q96DV4 380 aaKnown RBP0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 L3HYPDHQ96EM0 354 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 EDEM2Q9BV94 578 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 FICDQ9BVA6 458 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 TMEM117Q9H0C3 514 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 RANBP3Q9H6Z4 567 aaPredicted RBP0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 THUMPD1Q9NXG2 353 aaKnown RBP0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 IL36GQ9NZH8 169 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 SPATA7Q9P0W8 599 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 XCL2Q9UBD3 114 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 ZNF391Q9UJN7 358 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 NPIPA1Q9UND3 350 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 COPS3Q9UNS2 423 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 CHMP2BQ9UQN3 213 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 TMEM14AQ9Y6G1 99 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 TNS2Q63HR2 1409 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 CACNA1DQ01668 2161 aa0.77□□□□□ -2.29
RNU2-54P-201ENST00000410299 WDR62O43379 1518 aa0.76□□□□□ -2.29
RNU2-54P-201ENST00000410299 KDRP35968 1356 aa0.76□□□□□ -2.29
RNU2-54P-201ENST00000410299 IGKV2-24A0A0C4DH68 120 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms