RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 SPSB2Q99619 263 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 RXFP3Q9NSD7 469 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 TAS2R10Q9NYW0 307 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 TMEM72A0PK05 275 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 PATE3B3GLJ2 98 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 COL28A1Q2UY09 1125 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 PYDC2Q56P42 97 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 ZNF684Q5T5D7 378 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 IDNKQ5T6J7 187 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 MAMDC2Q7Z304 686 aaPredicted RBP18.23■□□□□ 0.51
USP39-204ENST00000409766 NRARPQ7Z6K4 114 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 DNAJA3Q96EY1 480 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 A8MVM7 634 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 SERPINA3P01011 423 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 APEX1P27695 318 aaKnown RBP18.22■□□□□ 0.51
USP39-204ENST00000409766 RFX2P48378 723 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 RPS11P62280 158 aaKnown RBP eCLIP18.22■□□□□ 0.51
USP39-204ENST00000409766 PHF19Q5T6S3 580 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 FAM69AQ5T7M9 428 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 SLC16A9Q7RTY1 509 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 CPEB2Q7Z5Q1 589 aaKnown RBP18.22■□□□□ 0.51
USP39-204ENST00000409766 OR6V1Q8N148 313 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 SLC26A1Q9H2B4 701 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 SRA1Q9HD15 236 aaKnown RBP18.22■□□□□ 0.51
USP39-204ENST00000409766 A0A0G2JK05 382 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 TRBV2A0A0J9YWF9 115 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 TRBV11-1A0A0K0K1C0 115 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 PRR32B1ATL7 298 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 H7C1C5 153 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 SLC19A2O60779 497 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 PTBP1P26599 531 aaKnown RBP eCLIP18.22■□□□□ 0.51
USP39-204ENST00000409766 GRPRP30550 384 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 THBS2P35442 1172 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 OR10A3P58181 314 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 LCN6P62502 163 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 SGCBQ16585 318 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 TIGD4Q8IY51 512 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 OR2T4Q8NH00 348 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 RPS4Y2Q8TD47 263 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 SLC25A36Q96CQ1 311 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 KCTD12Q96CX2 325 aaKnown RBP18.22■□□□□ 0.51
USP39-204ENST00000409766 ITPKCQ96DU7 683 aa18.22■□□□□ 0.51
USP39-204ENST00000409766 ZC3H10Q96K80 434 aaKnown RBP18.22■□□□□ 0.51
USP39-204ENST00000409766 B4DXG7 233 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 SNPHO15079 494 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 EDNRAP25101 427 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 SIGLEC14Q08ET2 396 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 MADCAM1Q13477 382 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 ASAH1Q13510 395 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 RIN1Q13671 783 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 P2RY14Q15391 338 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 TAB1Q15750 504 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 C1orf140Q5VVS0 124 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 OR5M10Q6IEU7 315 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 SFXN4Q6P4A7 337 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 TMEM205Q6UW68 189 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 PAMR1Q6UXH9 720 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 SPATC1Q76KD6 591 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 C1orf210Q8IVY1 113 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 CELF2-AS1Q8N7Q2 184 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 OR8K3Q8NH51 312 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 HGDQ93099 445 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 GFM1Q96RP9 751 aaKnown RBP18.21■□□□□ 0.51
USP39-204ENST00000409766 TTYH2Q9BSA4 534 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 CRB3Q9BUF7 120 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 ADAM30Q9UKF2 790 aa18.21■□□□□ 0.51
USP39-204ENST00000409766 TRAV1-2A0A0B4J238 106 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 MEN1O00255 615 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 RENP00797 406 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 FGF5P12034 268 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 PSMB10P40306 273 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 C17orf67Q0P5P2 114 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 EEF1A1P5Q5VTE0 462 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 IL17RDQ8NFM7 739 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 STK35Q8TDR2 534 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 RNF166Q96A37 237 aaPredicted RBP18.2■□□□□ 0.5
USP39-204ENST00000409766 TXNDC15Q96J42 360 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 CTRCQ99895 268 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 AKIRIN1Q9H9L7 192 aaPredicted RBP18.2■□□□□ 0.5
USP39-204ENST00000409766 ALPK2Q86TB3 2170 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 C11orf98E9PRG8 122 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 DXOO77932 396 aaKnown RBP18.2■□□□□ 0.5
USP39-204ENST00000409766 NAGAP17050 411 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 ELK1P19419 428 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 HTR3AP46098 478 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 DAB2P98082 770 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 CLPPQ16740 277 aaPredicted RBP18.2■□□□□ 0.5
USP39-204ENST00000409766 MRPL14Q6P1L8 145 aaKnown RBP18.2■□□□□ 0.5
USP39-204ENST00000409766 BPHLQ86WA6 291 aaPredicted RBP18.2■□□□□ 0.5
USP39-204ENST00000409766 RNF138Q8WVD3 245 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 HPS1Q92902 700 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 C8orf44Q96CB5 159 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 CFAP54Q96N23 3096 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 NEDD4LQ96PU5 975 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 UBL7Q96S82 380 aaPredicted RBP18.2■□□□□ 0.5
USP39-204ENST00000409766 PDCD1LG2Q9BQ51 273 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 SYT4Q9H2B2 425 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 INIPQ9NRY2 104 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 MALT1Q9UDY8 824 aa18.2■□□□□ 0.5
USP39-204ENST00000409766 RASD1Q9Y272 281 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms